FFCP PHASE1:Hg19::chr4:165675269..165675289,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100505989 | |EntrezGene=100505989 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000507311,NR_038834,uc003iqu.1_5end | |association_with_transcript=0bp_to_ENST00000507311,NR_038834,uc003iqu.1_5end | ||
|cluster_id=chr4:165675269..165675289,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_2_at_LOC100505989_5end | |description=CAGE_peak_2_at_LOC100505989_5end | ||
|id=chr4:165675269..165675289,+ | |id=chr4:165675269..165675289,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.57e-14;1!UBERON:0008425;2.57e-14;1!UBERON:0006595;4.31e-07;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;4.53e-08;2!DOID:3910;8.32e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.38e-08,2;DOID:3910,9.19e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004921!3.67e-17!129;UBERON:0004185!3.67e-17!129;UBERON:0000160!7.74e-17!27;UBERON:0001007!7.75e-15!155;UBERON:0001555!7.75e-15!155;UBERON:0007026!7.75e-15!155;UBERON:0004119!3.68e-13!169;UBERON:0000925!3.68e-13!169;UBERON:0006595!3.68e-13!169;UBERON:0005409!1.13e-12!35;UBERON:0000059!6.36e-12!11;UBERON:0001155!1.03e-09!9;UBERON:0005153!1.64e-09!37;UBERON:0000077!1.78e-08!130;UBERON:0007023!9.47e-08!115;UBERON:0002294!4.73e-07!7;UBERON:0001173!4.73e-07!7;UBERON:0004912!4.73e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.42e-26;17!UBERON:0002108;8.34e-25;4!UBERON:0005409;9.32e-21;22!UBERON:0001155;4.33e-14;9!UBERON:0004921;1.32e-12;33!UBERON:0000059;1.23e-11;11!UBERON:0002294;2.32e-08;7!UBERON:0001173;2.32e-08;7!UBERON:0003127;6.36e-08;2!UBERON:0004903;8.32e-08;2!UBERON:0002173;8.32e-08;2!UBERON:0002186;8.32e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.33e-26,17;UBERON:0002108,8.68e-25,4;UBERON:0005409,2.34e-18,25;UBERON:0001155,3.96e-14,9;UBERON:0004921,3.02e-12,118;UBERON:0001007,1.07e-11,145;UBERON:0001555,1.07e-11,145;UBERON:0007026,1.07e-11,145;UBERON:0000059,1.14e-11,11;UBERON:0004119,1.79e-10,160;UBERON:0000925,1.79e-10,160;UBERON:0006595,1.79e-10,160;UBERON:0003127,7.03e-08,2;UBERON:0004903,9.19e-08,2;UBERON:0002173,9.19e-08,2;UBERON:0002186,9.19e-08,2;UBERON:0011216,5.18e-07,223 | |||
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|short_description=p2@LOC100505989 | |short_description=p2@LOC100505989 | ||
}} | }} |
Latest revision as of 13:48, 16 September 2015
Short description: | p2@LOC100505989 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC100505989_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000507311, NR_038834, uc003iqu.1_5end |
EntrezGene: | LOC100505989 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.33e-26 | 17 |
small intestine | 8.68e-25 | 4 |
gastrointestinal system | 2.34e-18 | 25 |
colon | 3.96e-14 | 9 |
subdivision of digestive tract | 3.02e-12 | 118 |
digestive system | 1.07e-11 | 145 |
digestive tract | 1.07e-11 | 145 |
primitive gut | 1.07e-11 | 145 |
large intestine | 1.14e-11 | 11 |
endoderm-derived structure | 1.79e-10 | 160 |
endoderm | 1.79e-10 | 160 |
presumptive endoderm | 1.79e-10 | 160 |
open tracheal system trachea | 7.03e-08 | 2 |
bronchoalveolar duct junction | 9.19e-08 | 2 |
alveolar duct | 9.19e-08 | 2 |
bronchiole | 9.19e-08 | 2 |
organ system subdivision | 5.18e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.38e-08 | 2 |
lung adenocarcinoma | 9.19e-08 | 2 |