FFCP PHASE1:Hg19::chr14:92302825..92302837,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:92302825..92302837,- to FFCP PHASE1:Hg19::chr14:92302825..92302837,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=123036 | |EntrezGene=123036 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19859 | |HGNC=19859 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N9U0 | |UniProt=Q8N9U0 | ||
|association_with_transcript=11bp_to_NM_001128595,NM_152332,uc001xzt.3,uc001xzu.3,uc010auc.2_5end | |||
|cluster_id=chr14:92302825..92302837,- | |||
|coexpression_cluster_id=C2323 | |||
|description=CAGE_peak_7_at_TC2N_5end | |||
|id=chr14:92302825..92302837,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.09e-07;2!UBERON:0006595;2.69e-07;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:299;1.92e-08;25!DOID:3493;1.57e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.55e-08,25;DOID:3493,7.88e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.16e-17!115;UBERON:0004119!4.79e-10!169;UBERON:0000925!4.79e-10!169;UBERON:0006595!4.79e-10!169;UBERON:0001007!2.98e-09!155;UBERON:0001555!2.98e-09!155;UBERON:0007026!2.98e-09!155;UBERON:0001004!9.13e-08!72;UBERON:0004921!7.13e-07!129;UBERON:0004185!7.13e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;9.81e-08;33!UBERON:0001041;1.42e-07;14!UBERON:0003127;1.67e-07;2!UBERON:0000341;5.26e-07;2!UBERON:0006562;5.26e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.67e-15,114;UBERON:0004119,6.18e-09,160;UBERON:0000925,6.18e-09,160;UBERON:0006595,6.18e-09,160;UBERON:0001007,6.99e-08,145;UBERON:0001555,6.99e-08,145;UBERON:0007026,6.99e-08,145;UBERON:0003127,1.09e-07,2;UBERON:0000341,2.36e-07,2 | |||
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| ||
|short_description=p7@TC2N | |||
}} | }} |
Latest revision as of 13:49, 16 September 2015
Short description: | p7@TC2N |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TC2N_5end |
Coexpression cluster: | C2323_pancreas_bile_signet_breast_trachea_parotid_lung |
Association with transcript: | 11bp_to_NM_001128595, NM_152332, uc001xzt.3, uc001xzu.3, uc010auc.2_5end |
EntrezGene: | TC2N |
HGNC: | 19859 |
UniProt: | Q8N9U0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.67e-15 | 114 |
endoderm-derived structure | 6.18e-09 | 160 |
endoderm | 6.18e-09 | 160 |
presumptive endoderm | 6.18e-09 | 160 |
digestive system | 6.99e-08 | 145 |
digestive tract | 6.99e-08 | 145 |
primitive gut | 6.99e-08 | 145 |
open tracheal system trachea | 1.09e-07 | 2 |
throat | 2.36e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.55e-08 | 25 |
signet ring cell adenocarcinoma | 7.88e-08 | 2 |