FFCP PHASE1:Hg19::chr10:118187463..118187478,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:118187463..118187478,+
|short_description=p4@PNLIPRP3
|description=CAGE_peak_4_at_PNLIPRP3_5end
|association_with_transcript=39bp_to_NM_001011709,uc001lcl...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=119548 | |EntrezGene=119548 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23492 | |HGNC=23492 | ||
|TSSclassifier=strong | |||
|UniProt=Q17RR3 | |UniProt=Q17RR3 | ||
|association_with_transcript=39bp_to_NM_001011709,uc001lcl.3_5end | |||
|cluster_id=chr10:118187463..118187478,+ | |||
|coexpression_cluster_id=C1566 | |||
|description=CAGE_peak_4_at_PNLIPRP3_5end | |||
|id=chr10:118187463..118187478,+ | |||
|ontology_enrichment_celltype=CL:0000622!1.09e-21!5;CL:0002623!6.94e-21!3;CL:0002076!1.13e-19!43;CL:0000154!4.13e-18!6;CL:0002327!1.01e-15!4;CL:0000223!1.01e-13!59;CL:0002368!1.48e-12!13;CL:0000150!3.97e-12!9;CL:0000240!3.66e-10!6;CL:0000311!3.66e-10!6;CL:0000079!3.66e-10!6;CL:0000237!3.66e-10!6;CL:0000036!3.66e-10!6;CL:0000357!3.66e-10!6;CL:0000114!3.66e-10!6;CL:0000068!8.91e-10!3;CL:0000069!8.91e-10!3;CL:0000307!8.91e-10!3;CL:0000377!8.91e-10!3;CL:0002231!1.11e-09!3;CL:0000066!3.96e-08!254;CL:0002159!3.97e-08!13;CL:0000362!7.85e-08!8;CL:0002336!1.18e-07!1;CL:0002261!1.18e-07!1;CL:0002170!1.18e-07!1;CL:0002251!1.22e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002623;4.12e-54;3!CL:0000622;7.86e-33;5!CL:0000154;1.69e-27;6!CL:0002327;3.26e-19;4!CL:0000150;1.36e-18;9!CL:0000197;3.14e-13;6!CL:0000098;3.14e-13;6!CL:0002167;3.14e-13;6!CL:0002076;4.69e-12;42!CL:0002251;1.01e-08;20!CL:0002231;2.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,4.51e-54,3;CL:0000622,8.30e-33,5;CL:0000154,1.76e-27,6;CL:0002327,3.26e-19,4;CL:0000150,1.41e-18,9;CL:0002076,3.05e-15,42;CL:0000197,3.14e-13,6;CL:0000098,3.14e-13,6;CL:0002167,3.14e-13,6;CL:0000223,5.25e-11,58;CL:0002251,1.03e-08,20;CL:0000066,6.20e-08,253;CL:0002231,2.19e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.80e-07;58 | |||
|ontology_enrichment_disease=DOID:3151!1.04e-07!1;DOID:3149!1.04e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001911!1.01e-15!4;UBERON:0005333!1.01e-15!4;UBERON:0008425!1.01e-15!4;UBERON:0005311!1.01e-15!4;UBERON:0001044!1.04e-10!6;UBERON:0003293!1.04e-10!6;UBERON:0003294!1.04e-10!6;UBERON:0010047!1.04e-10!6;UBERON:0000167!1.04e-10!6;UBERON:0003102!1.42e-10!95;UBERON:0002365!9.57e-10!31;UBERON:0002330!9.57e-10!31;UBERON:0000161!2.50e-08!35;UBERON:0000076!4.22e-08!8;UBERON:0000989!6.97e-08!1;UBERON:0008811!6.97e-08!1;UBERON:0006258!6.97e-08!1;UBERON:0005876!6.97e-08!1;UBERON:0004874!6.97e-08!1;UBERON:0000165!7.28e-08!28;UBERON:0000930!7.28e-08!28;UBERON:0007029!7.45e-08!1;UBERON:0002530!1.11e-07!59;UBERON:0000166!1.26e-07!21;UBERON:0001003!1.39e-07!14;UBERON:0007376!1.39e-07!14;UBERON:0007383!1.39e-07!14;UBERON:0000997!1.75e-07!1;UBERON:0005056!1.75e-07!1;UBERON:0001004!2.15e-07!72;UBERON:0000014!2.27e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.69e-27;6!UBERON:0003293;1.69e-27;6!UBERON:0003294;1.69e-27;6!UBERON:0010047;1.69e-27;6!UBERON:0003408;1.69e-27;6!UBERON:0000167;1.69e-27;6!UBERON:0001911;3.26e-19;4!UBERON:0002365;1.24e-14;31!UBERON:0002330;1.24e-14;31!UBERON:0001041;3.38e-12;14!UBERON:0000161;3.78e-09;19!UBERON:0000166;3.78e-09;19!UBERON:0002530;1.47e-08;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.76e-27,6;UBERON:0003293,1.76e-27,6;UBERON:0003294,1.76e-27,6;UBERON:0010047,1.76e-27,6;UBERON:0000167,1.76e-27,6;UBERON:0001911,3.26e-19,4;UBERON:0005333,3.26e-19,4;UBERON:0008425,3.26e-19,4;UBERON:0005311,3.26e-19,4;UBERON:0003408,8.57e-17,10;UBERON:0002365,1.16e-14,31;UBERON:0002330,1.16e-14,31;UBERON:0002530,6.54e-11,59;UBERON:0000076,4.22e-10,8;UBERON:0000161,2.39e-08,36;UBERON:0000166,5.66e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.35865511190223,4.35950907770943,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,4.60404944679482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,1.65284915360978,0.384380134730212,0,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865999014529609,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.95228849404445,5.59869534029676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35153944742377,2.90221411059715,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,0,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.35865511190223,4.35950907770943,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,4.60404944679482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,1.65284915360978,0.384380134730212,0,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865999014529609,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.95228849404445,5.59869534029676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35153944742377,2.90221411059715,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@PNLIPRP3 | |||
}} | }} |
Latest revision as of 14:02, 16 September 2015
Short description: | p4@PNLIPRP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PNLIPRP3_5end |
Coexpression cluster: | C1566_Mammary_nasal_Prostate_salivary_Mallassezderived_Keratinocyte_Small |
Association with transcript: | 39bp_to_NM_001011709, uc001lcl.3_5end |
EntrezGene: | PNLIPRP3 |
HGNC: | 23492 |
UniProt: | Q17RR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 4.51e-54 | 3 |
acinar cell | 8.30e-33 | 5 |
protein secreting cell | 1.76e-27 | 6 |
mammary gland epithelial cell | 3.26e-19 | 4 |
glandular epithelial cell | 1.41e-18 | 9 |
endo-epithelial cell | 3.05e-15 | 42 |
receptor cell | 3.14e-13 | 6 |
sensory epithelial cell | 3.14e-13 | 6 |
olfactory epithelial cell | 3.14e-13 | 6 |
endodermal cell | 5.25e-11 | 58 |
epithelial cell of alimentary canal | 1.03e-08 | 20 |
epithelial cell | 6.20e-08 | 253 |
epithelial cell of prostate | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.76e-27 | 6 |
gland of oral region | 1.76e-27 | 6 |
gland of foregut | 1.76e-27 | 6 |
oral gland | 1.76e-27 | 6 |
oral cavity | 1.76e-27 | 6 |
mammary gland | 3.26e-19 | 4 |
mammary bud | 3.26e-19 | 4 |
mammary ridge | 3.26e-19 | 4 |
mammary placode | 3.26e-19 | 4 |
gland of gut | 8.57e-17 | 10 |
exocrine gland | 1.16e-14 | 31 |
exocrine system | 1.16e-14 | 31 |
gland | 6.54e-11 | 59 |
external ectoderm | 4.22e-10 | 8 |
orifice | 2.39e-08 | 36 |
oral opening | 5.66e-08 | 22 |