FFCP PHASE1:Hg19::chr12:114845970..114846000,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=255480 | |EntrezGene=255480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000531202,ENST00000532697,NR_038440_5end | |association_with_transcript=0bp_to_ENST00000531202,ENST00000532697,NR_038440_5end | ||
|cluster_id=chr12:114845970..114846000,+ | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_1_at_LOC255480_5end | |description=CAGE_peak_1_at_LOC255480_5end | ||
|id=chr12:114845970..114846000,+ | |id=chr12:114845970..114846000,+ | ||
|ontology_enrichment_celltype=CL:0002620!5.86e-19!23;CL:0000057!1.25e-16!75;CL:0002334!2.80e-11!12;CL:0000569!1.93e-09!4;CL:0000011!1.93e-09!4;CL:0002580!2.75e-08!3;CL:0000055!4.11e-08!180;CL:0002494!4.89e-08!16;CL:0002600!9.60e-07!2 | |ontology_enrichment_celltype=CL:0002620!5.86e-19!23;CL:0000057!1.25e-16!75;CL:0002334!2.80e-11!12;CL:0000569!1.93e-09!4;CL:0000011!1.93e-09!4;CL:0002580!2.75e-08!3;CL:0000055!4.11e-08!180;CL:0002494!4.89e-08!16;CL:0002600!9.60e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.60e-24;23!CL:0002600;1.82e-13;2!CL:0002598;2.25e-13;2!CL:0002574;1.12e-07;1!CL:0002599;2.09e-07;1!CL:0002591;4.46e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.08e-23,23;CL:0002600,1.77e-13,2;CL:0002598,2.12e-13,2;CL:0002574,1.12e-07,1;CL:0002599,1.74e-07,1;CL:0002591,6.57e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.09e-07;1!UBERON:0009143;4.46e-07;1!UBERON:0003124;4.46e-07;1 | |||
|ontology_enrichment_disease=DOID:17!1.84e-13!5;DOID:450!1.84e-13!5;DOID:66!1.84e-13!5;DOID:423!1.84e-13!5;DOID:0080000!1.84e-13!5;DOID:11722!1.84e-13!5 | |||
|ontology_enrichment_disease_v019=DOID:17;7.10e-29;5!DOID:450;7.10e-29;5!DOID:66;7.10e-29;5!DOID:423;7.10e-29;5!DOID:0080000;7.10e-29;5!DOID:11722;7.10e-29;5!DOID:6193;2.09e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.34e-29,5;DOID:450,6.34e-29,5;DOID:66,6.34e-29,5;DOID:423,6.34e-29,5;DOID:0080000,6.34e-29,5;DOID:11722,6.34e-29,5;DOID:6193,2.23e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.51e-27!27;UBERON:0000948!8.04e-22!24;UBERON:0005498!8.04e-22!24;UBERON:0004140!8.04e-22!24;UBERON:0009881!8.04e-22!24;UBERON:0004141!8.04e-22!24;UBERON:0003084!8.04e-22!24;UBERON:0007005!8.04e-22!24;UBERON:0004139!8.04e-22!24;UBERON:0004291!8.04e-22!24;UBERON:0003103!2.62e-15!69;UBERON:0002199!1.73e-10!45;UBERON:0002416!1.73e-10!45;UBERON:0000915!6.17e-10!52;UBERON:0002097!2.23e-09!40;UBERON:0003978!3.43e-08!3;UBERON:0009751!3.43e-08!3;UBERON:0000946!3.43e-08!3;UBERON:0002523!3.43e-08!3;UBERON:0005983!3.43e-08!3;UBERON:0002165!3.43e-08!3;UBERON:0002062!3.43e-08!3;UBERON:0007280!3.43e-08!3;UBERON:0005181!4.94e-08!35;UBERON:0004151!5.09e-08!3;UBERON:0004145!5.34e-08!3;UBERON:0001443!1.33e-07!11;UBERON:0005178!5.82e-07!34;UBERON:0002224!5.82e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0005178;8.45e-12;34!UBERON:0002224;8.45e-12;34!UBERON:0005181;6.43e-11;35!UBERON:0007196;5.31e-10;15!UBERON:0001558;5.31e-10;15!UBERON:0002097;1.49e-09;41!UBERON:0001043;7.87e-09;3!UBERON:0002135;1.31e-07;1!UBERON:0002199;2.14e-07;46!UBERON:0002416;2.14e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,8.08e-13,34;UBERON:0002224,8.08e-13,34;UBERON:0002097,1.59e-12,41;UBERON:0005181,2.07e-12,35;UBERON:0002199,5.66e-11,46;UBERON:0002416,5.66e-11,46;UBERON:0007196,4.65e-10,15;UBERON:0001558,4.65e-10,15;UBERON:0001043,8.69e-09,3;UBERON:0009143,8.69e-09,3;UBERON:0000915,7.18e-08,52;UBERON:0002135,1.36e-07,1;UBERON:0003102,2.45e-07,99 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0,0,0,0,0,0,0,1.72013755551056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74000264525148,0.622422070799533,0.269421344139376,0.326923806226917,0,0,0,0,0,0.896692083310806,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,1.25572744982203,2.13557388818567,1.27159140695737,1.80054657650641,1.44273540933814,0,0,0.843881661206331,0.487185025805993,3.02920529092937,3.49789614840738,0,1.42003837006646,1.0075209822764,2.03472710772585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0.300946099727719,0,0,0,0,6.0818530127658,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0.992431231275107,0.920771839728375,0.841980283299221,0,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0.116210378459959,0,0,0,1.26295892981067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.854738209659,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11795582622668,2.56763392820352,0,0,0,0,0,0,0,0,2.92580243453754,0,0,0,0,1.13008116620243,0,0,0,3.47265320560013,4.59126326432643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23581842213102,0,0,0,1.16386819786103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46851842035607,0.229160424011684,0.717873024576814,0.599037001496973,0.429226048136571,1.78537165953498,2.88888931692923,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,1.17466153824464,2.51526888159466,0.828478110694391,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.604923695052956,0.466311601748341,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6746563282715,0,0.109209638192014,0,45.0658830615568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,1.5966426629275,0,0,0,0,0,0,1.0989032999072,0,0,0,0,0,0,0,0,0,1.60342272946051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.54503513781167,0.642301571672949,0,0,0,0,0,0,0,1.72013755551056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74000264525148,0.622422070799533,0.269421344139376,0.326923806226917,0,0,0,0,0,0.896692083310806,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,1.25572744982203,2.13557388818567,1.27159140695737,1.80054657650641,1.44273540933814,0,0,0.843881661206331,0.487185025805993,3.02920529092937,3.49789614840738,0,1.42003837006646,1.0075209822764,2.03472710772585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0.300946099727719,0,0,0,0,6.0818530127658,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0.992431231275107,0.920771839728375,0.841980283299221,0,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0.246381468041427,0,0.116210378459959,0,0,0,1.26295892981067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.854738209659,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11795582622668,2.56763392820352,0,0,0,0,0,0,0,0,2.92580243453754,0,0,0,0,1.13008116620243,0,0,0,3.47265320560013,4.59126326432643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23581842213102,0,0,0,1.16386819786103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46851842035607,0.229160424011684,0.717873024576814,0.599037001496973,0.429226048136571,1.78537165953498,2.88888931692923,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,1.17466153824464,2.51526888159466,0.828478110694391,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.604923695052956,0.466311601748341,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6746563282715,0,0.109209638192014,0,45.0658830615568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,1.5966426629275,0,0,0,0,0,0,1.0989032999072,0,0,0,0,0,0,0,0,0,1.60342272946051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@LOC255480 | |short_description=p1@LOC255480 | ||
}} | }} |
Latest revision as of 14:17, 16 September 2015
Short description: | p1@LOC255480 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC255480_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | 0bp_to_ENST00000531202, ENST00000532697, NR_038440_5end |
EntrezGene: | LOC255480 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.08e-23 | 23 |
smooth muscle cell of trachea | 1.77e-13 | 2 |
bronchial smooth muscle cell | 2.12e-13 | 2 |
stromal cell of pancreas | 1.12e-07 | 1 |
smooth muscle cell of the esophagus | 1.74e-07 | 1 |
smooth muscle cell of the pulmonary artery | 6.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 8.08e-13 | 34 |
thoracic cavity | 8.08e-13 | 34 |
skin of body | 1.59e-12 | 41 |
thoracic segment organ | 2.07e-12 | 35 |
integument | 5.66e-11 | 46 |
integumental system | 5.66e-11 | 46 |
tracheobronchial tree | 4.65e-10 | 15 |
lower respiratory tract | 4.65e-10 | 15 |
esophagus | 8.69e-09 | 3 |
esophageal region | 8.69e-09 | 3 |
thoracic segment of trunk | 7.18e-08 | 52 |
mitral valve | 1.36e-07 | 1 |
surface structure | 2.45e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.34e-29 | 5 |
myotonic disease | 6.34e-29 | 5 |
muscle tissue disease | 6.34e-29 | 5 |
myopathy | 6.34e-29 | 5 |
muscular disease | 6.34e-29 | 5 |
myotonic dystrophy | 6.34e-29 | 5 |
epithelioid sarcoma | 2.23e-07 | 1 |