FFCP PHASE1:Hg19::chr1:236686501..236686513,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3964 | |EntrezGene=3964 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6569 | |HGNC=6569 | ||
|TSSclassifier=strong | |||
|UniProt=O00214 | |UniProt=O00214 | ||
|association_with_transcript=-225bp_to_ENST00000341872,ENST00000450372,NM_006499,NM_201543,uc001hxy.1,uc001hxz.1,uc009xgg.1_5end | |association_with_transcript=-225bp_to_ENST00000341872,ENST00000450372,NM_006499,NM_201543,uc001hxy.1,uc001hxz.1,uc009xgg.1_5end | ||
|cluster_id=chr1:236686501..236686513,+ | |||
|coexpression_cluster_id=C108 | |coexpression_cluster_id=C108 | ||
|description=CAGE_peak_8_at_LGALS8_5end | |description=CAGE_peak_8_at_LGALS8_5end | ||
|id=chr1:236686501..236686513,+ | |id=chr1:236686501..236686513,+ | ||
|ontology_enrichment_celltype=CL:0000181!6.89e-08!12;CL:0000417!6.89e-08!12;CL:0000668!6.89e-08!12;CL:0000414!6.89e-08!12;CL:0000412!6.89e-08!12;CL:0000182!6.89e-08!12;CL:0000223!8.72e-08!59 | |ontology_enrichment_celltype=CL:0000181!6.89e-08!12;CL:0000417!6.89e-08!12;CL:0000668!6.89e-08!12;CL:0000414!6.89e-08!12;CL:0000412!6.89e-08!12;CL:0000182!6.89e-08!12;CL:0000223!8.72e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002231;1.71e-14;3!CL:0002327;2.53e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,1.60e-14,3;CL:0002327,2.53e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;6.62e-41;1!UBERON:0009847;1.71e-14;3!UBERON:0003353;1.71e-14;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;2.53e-11;4!DOID:1612;2.53e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.53e-11,4;DOID:1612,2.53e-11,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002367;2.17e-15;11!UBERON:0010147;2.17e-15;11!UBERON:0003937;3.36e-14;12!UBERON:0005399;3.36e-14;12!UBERON:0001911;2.53e-11;4!UBERON:0003101;3.26e-08;22!UBERON:0000079;3.26e-08;22!UBERON:0000077;7.24e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,2.33e-15,11;UBERON:0010147,2.33e-15,11;UBERON:0009846,2.33e-15,11;UBERON:0003353,2.33e-15,11;UBERON:0004902,2.33e-15,11;UBERON:0003820,2.33e-15,11;UBERON:0009847,2.33e-15,11;UBERON:0003937,3.59e-14,12;UBERON:0005399,3.59e-14,12;UBERON:0000162,2.66e-12,14;UBERON:0001353,2.66e-12,14;UBERON:0000163,2.66e-12,14;UBERON:0006866,2.66e-12,14;UBERON:0000164,2.66e-12,14;UBERON:0000931,2.66e-12,14;UBERON:0004122,1.50e-11,15;UBERON:0001911,2.53e-11,4;UBERON:0005333,2.53e-11,4;UBERON:0008425,2.53e-11,4;UBERON:0005311,2.53e-11,4;UBERON:0005153,1.89e-10,37;UBERON:0001046,2.46e-09,19;UBERON:0005157,2.16e-08,47;UBERON:0003101,3.39e-08,22;UBERON:0000079,3.39e-08,22;UBERON:0002530,7.84e-07,59 | |||
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|short_description=p8@LGALS8 | |short_description=p8@LGALS8 | ||
}} | }} |
Latest revision as of 14:17, 16 September 2015
Short description: | p8@LGALS8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LGALS8_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | -225bp_to_ENST00000341872, ENST00000450372, NM_006499, NM_201543, uc001hxy.1, uc001hxz.1, uc009xgg.1_5end |
EntrezGene: | LGALS8 |
HGNC: | 6569 |
UniProt: | O00214 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 1.60e-14 | 3 |
mammary gland epithelial cell | 2.53e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 2.33e-15 | 11 |
male accessory sex gland | 2.33e-15 | 11 |
embryonic cloacal epithelium | 2.33e-15 | 11 |
epithelium of hindgut | 2.33e-15 | 11 |
urogenital sinus epithelium | 2.33e-15 | 11 |
prostate bud | 2.33e-15 | 11 |
prostate field | 2.33e-15 | 11 |
sex gland | 3.59e-14 | 12 |
male reproductive gland | 3.59e-14 | 12 |
cloaca | 2.66e-12 | 14 |
anal region | 2.66e-12 | 14 |
embryonic cloaca | 2.66e-12 | 14 |
terminal part of digestive tract | 2.66e-12 | 14 |
primitive urogenital sinus | 2.66e-12 | 14 |
proctodeum | 2.66e-12 | 14 |
genitourinary system | 1.50e-11 | 15 |
mammary gland | 2.53e-11 | 4 |
mammary bud | 2.53e-11 | 4 |
mammary ridge | 2.53e-11 | 4 |
mammary placode | 2.53e-11 | 4 |
epithelial bud | 1.89e-10 | 37 |
hindgut | 2.46e-09 | 19 |
epithelial fold | 2.16e-08 | 47 |
male organism | 3.39e-08 | 22 |
male reproductive system | 3.39e-08 | 22 |
gland | 7.84e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.53e-11 | 4 |
breast cancer | 2.53e-11 | 4 |