FFCP PHASE1:Hg19::chr3:168864383..168864400,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:168864383..168864400,- to FFCP PHASE1:Hg19::chr3:168864383..168864400,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2122 | |EntrezGene=2122 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3498 | |HGNC=3498 | ||
|TSSclassifier=strong | |||
|UniProt=Q03112 | |UniProt=Q03112 | ||
|association_with_transcript=0bp_to_NM_001105078,uc003ffn.3_5end | |||
|cluster_id=chr3:168864383..168864400,- | |||
|description=CAGE_peak_7_at_MECOM_5end | |||
|id=chr3:168864383..168864400,- | |||
|ontology_enrichment_celltype=CL:0002139!2.50e-15!24;CL:0000071!1.55e-14!18;CL:0002546!1.55e-14!18;CL:0000115!9.57e-10!35;CL:1000413!1.26e-08!9;CL:0002078!4.28e-08!44;CL:0000222!5.48e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.19e-26;24!CL:0000071;2.28e-23;18!CL:0002543;9.00e-16;6!CL:0000115;1.15e-15;36!CL:1000413;5.80e-15;9!CL:0002078;7.47e-10;45!CL:0002618;3.41e-09;3!CL:0000213;2.87e-08;58!CL:0000215;2.87e-08;58!CL:0002544;9.00e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.38e-26,24;CL:0000071,1.27e-23,18;CL:0002546,1.27e-23,18;CL:0000115,1.39e-18,36;CL:0002543,5.08e-16,6;CL:1000413,4.81e-15,9;CL:0002078,6.10e-14,45;CL:0000213,4.35e-11,58;CL:0000215,4.35e-11,58;CL:0002618,3.72e-09,3;CL:0002544,6.42e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002546;2.28e-23;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.70e-26!115;UBERON:0004111!1.96e-26!241;UBERON:0000477!3.06e-26!286;UBERON:0000025!6.19e-25!194;UBERON:0004872!1.25e-24!84;UBERON:0001981!5.30e-23!60;UBERON:0007500!5.30e-23!60;UBERON:0004537!5.30e-23!60;UBERON:0006965!5.30e-23!60;UBERON:0000055!1.87e-22!69;UBERON:0000483!6.36e-22!309;UBERON:0000119!3.13e-21!312;UBERON:0002049!3.31e-21!79;UBERON:0007798!3.31e-21!79;UBERON:0001009!2.43e-19!113;UBERON:0003914!7.91e-18!118;UBERON:0004535!9.91e-18!110;UBERON:0001637!8.60e-15!42;UBERON:0003509!8.60e-15!42;UBERON:0004572!8.60e-15!42;UBERON:0000467!1.26e-14!625;UBERON:0001986!1.55e-14!18;UBERON:0004638!1.55e-14!18;UBERON:0004852!1.55e-14!18;UBERON:0000468!1.59e-14!659;UBERON:0000480!1.75e-14!626;UBERON:0000481!2.74e-13!347;UBERON:0004573!4.71e-12!33;UBERON:0004571!4.71e-12!33;UBERON:0000475!6.19e-11!365;UBERON:0000947!1.17e-10!21;UBERON:0010191!1.17e-10!21;UBERON:0000487!1.60e-10!22;UBERON:0000922!3.00e-10!612;UBERON:0003103!4.16e-10!69;UBERON:0003075!6.22e-10!86;UBERON:0007284!6.22e-10!86;UBERON:0002050!7.51e-10!605;UBERON:0005423!7.51e-10!605;UBERON:0000923!1.59e-09!604;UBERON:0005291!1.59e-09!604;UBERON:0006598!1.59e-09!604;UBERON:0002532!1.59e-09!604;UBERON:0006914!1.80e-09!25;UBERON:0000490!5.14e-09!138;UBERON:0002346!8.08e-09!90;UBERON:0003915!1.26e-08!9;UBERON:0004700!1.26e-08!9;UBERON:0001917!1.26e-08!9;UBERON:0007100!2.32e-08!27;UBERON:0001049!3.41e-08!57;UBERON:0005068!3.41e-08!57;UBERON:0006241!3.41e-08!57;UBERON:0007135!3.41e-08!57;UBERON:0001638!2.36e-07!9;UBERON:0003920!2.36e-07!9;UBERON:0004582!2.36e-07!9;UBERON:0000153!4.85e-07!129;UBERON:0007811!4.85e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.28e-23;18!UBERON:0001986;2.28e-23;18!UBERON:0004852;2.28e-23;18!UBERON:0000487;1.66e-18;22!UBERON:0006914;6.92e-16;25!UBERON:0003915;5.80e-15;9!UBERON:0004700;5.80e-15;9!UBERON:0001917;5.80e-15;9!UBERON:0000490;5.35e-12;33!UBERON:0001638;2.92e-10;9!UBERON:0003920;2.92e-10;9!UBERON:0004582;2.92e-10;9!UBERON:0000055;6.35e-09;65!UBERON:0007500;7.17e-09;56!UBERON:0001981;7.17e-09;56!UBERON:0004537;7.17e-09;56!UBERON:0000947;8.02e-09;21!UBERON:0010191;8.02e-09;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.27e-23,18;UBERON:0001986,1.27e-23,18;UBERON:0004852,1.27e-23,18;UBERON:0000055,8.66e-19,68;UBERON:0000487,1.04e-18,22;UBERON:0007500,1.05e-16,59;UBERON:0001981,1.05e-16,59;UBERON:0004537,1.05e-16,59;UBERON:0006965,1.05e-16,59;UBERON:0006914,4.62e-16,25;UBERON:0002049,1.70e-15,78;UBERON:0007798,1.70e-15,78;UBERON:0003915,4.81e-15,9;UBERON:0004700,4.81e-15,9;UBERON:0001917,4.81e-15,9;UBERON:0004111,5.63e-15,240;UBERON:0004872,5.81e-15,83;UBERON:0000025,3.42e-14,192;UBERON:0001009,9.73e-13,112;UBERON:0004535,3.70e-12,109;UBERON:0007023,1.65e-11,114;UBERON:0001638,2.02e-10,9;UBERON:0003920,2.02e-10,9;UBERON:0004582,2.02e-10,9;UBERON:0003914,1.42e-09,117;UBERON:0000483,3.96e-09,306;UBERON:0000119,6.29e-09,309;UBERON:0000947,6.35e-09,21;UBERON:0010191,6.35e-09,21;UBERON:0001637,5.11e-08,42;UBERON:0003509,5.11e-08,42;UBERON:0004572,5.11e-08,42 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0,0.612002073732759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.527008714158756,0.261958150995425,0,0,0,0,0,0,0,0,2.78267370313387,1.72046919021225,0.347140501607594,2.26123176769604,2.09749718104953,2.20094433552054,3.55291443112578,4.65150166504792,2.13459757612026,6.02497102976406,0.402829317109147,0.760272105718513,0.24406205754817,2.20597848207521,0.81014194788176,3.12549048994279,1.34717623575702,2.36484109014977,1.53316637465883,1.89853131913626,1.28241220751285,0,0,0,0,0.886413581652058,0.794455084879313,1.14734648299525,1.41867352879343,0.560677600142307,0,0.74000264525148,0,0.67355336034844,0.653847612453835,0,0,0,0.312160076830321,0.570471821544449,0,0,0,0,0.204154171254893,0.368502951935304,0,0,0,0,0,0,0,0,0,0,0,0.794025282120147,0,0,0.211931901159562,0.300091096084402,0.515262646192195,0.257640540045629,0,0,0.389748020644795,0,0.184099797284599,0.161646056818812,0.710019185033229,0.604512589365842,0,0,0.272746120590835,0,0,0.132529768321485,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0.220587945464788,0,0.237270619111097,0,0,0.38474715694639,2.21446636387394,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.201057944823262,0.185176890317059,0,0,1.44331342025273,0.463721619900307,0.234817388471643,0,0,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.316654886678627,0,0.340187410553031,0,0,0.270946437543853,0,0,0,0.447749509444357,0,0,0,0,0.325378394664303,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0.290033387828457,0.170453254832202,0.356128142586949,0.165284915360978,0,0.127612712494584,0,1.39453664789186,1.5740617341532,2.7881490806424,0.616067160352178,0,0.869932992075073,0.18532421910392,0.429374660225974,0,0,0,0.255897791311334,0.42793898803392,0.318203247925937,0,0,0,0,0.606547444719948,0,0.842516912477962,0,0.243713489631284,1.05650146756755,0.136499911407986,0,0,0.551365343546124,0,0.438450885253763,0,0,0,0.92947049429925,0.281695602532241,0.573645408816206,0.0982490410131212,0.35667105148125,0.354761064070598,0,0,0.379473173765715,0,0,0.670302275535787,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,1.1490322207942,0,0,0,0,0,0,1.35433422241283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12778627451629,0.121360521749513,0,0,0,0,0,0,1.26602474769461,0.333926115068718,0,0,0.796991953004279,0,0,0,0,0.311039587661807,0.539210106883961,0.179021174675609,0,1.67693789582787,0,0,0,0.278304294485554,3.99227596002388,0,0,2.89999830173917,0.227586896570999,0,0,0,0,0.173624994933292,0,1.68835014075571,0,0.663475559587348,0.295547618953547,0.658156191461918,0.653630781113941,0.139423744278603,1.07730361905316,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0.37950746544837,0.158936578980379,1.05499032264014,0.326465616318295,0,0.216388639742091,0,0.353830258013357,1.83309043480088,0,0,0,0.337005664903385,2.40773294189637,0.702793337176017,0,0,0,0,0,0,0.252746318513952,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0.391969589657511,0.34823682632161,1.39781334593624,0,0.290268993867255,0,0,0.775912131907355,0,0.677942222341597,0,0.19871461170299,0.126621591911757,0,0.0801588202515337,0.85381197895741,0,1.00863292007874,0,0,0,0.124252535565433,0,0,0.104602846312333,0.917983958726896,0.577901179803038,0,1.50595916781192,0,0.429765441419957,0,0.558564802544508,1.83328339209347,3.58936512288407,0.798716001995964,1.71690419254628,0.89268582976749,1.2764859772478,0,0,0,0,0,0.0984274815147488,0,0,1.36203406111576,0,0,0,0,0,0.182248669974074,0,0.472834243795189,0.577000469484979,0.316801009558219,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,0.293104467356165,0,0.775697738169303,1.3223260174269,0,0.704815022316672,1.06787412567695,2.67247318669432,0.414239055347196,0.496166021811951,0,0,0,0.544017803369474,0.5013797880454,0,0.327872630709804,0,0,0.244052529803926,1.8778639605975,0.573409195690071,1.22021956690538,0.807253238237985,0,0.37494122388632,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0.591420599958536,0,0,0.155262956876259,0.414706207840855,0,0,0,0.380805212168795,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0.906823702049089,1.15761237161917,0,0.179088841081487,0,0,0.353378291891762,0,0,0,0,0,1.93561810612423,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0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| ||
|short_description=p7@MECOM | |||
}} | }} |
Latest revision as of 14:22, 16 September 2015
Short description: | p7@MECOM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MECOM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001105078, uc003ffn.3_5end |
EntrezGene: | MECOM |
HGNC: | 3498 |
UniProt: | Q03112 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.38e-26 | 24 |
blood vessel endothelial cell | 1.27e-23 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.27e-23 | 18 |
endothelial cell | 1.39e-18 | 36 |
vein endothelial cell | 5.08e-16 | 6 |
endothelial cell of artery | 4.81e-15 | 9 |
meso-epithelial cell | 6.10e-14 | 45 |
lining cell | 4.35e-11 | 58 |
barrier cell | 4.35e-11 | 58 |
endothelial cell of umbilical vein | 3.72e-09 | 3 |
aortic endothelial cell | 6.42e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.27e-23 | 18 |
endothelium | 1.27e-23 | 18 |
cardiovascular system endothelium | 1.27e-23 | 18 |
vessel | 8.66e-19 | 68 |
simple squamous epithelium | 1.04e-18 | 22 |
epithelial tube open at both ends | 1.05e-16 | 59 |
blood vessel | 1.05e-16 | 59 |
blood vasculature | 1.05e-16 | 59 |
vascular cord | 1.05e-16 | 59 |
squamous epithelium | 4.62e-16 | 25 |
vasculature | 1.70e-15 | 78 |
vascular system | 1.70e-15 | 78 |
endothelial tube | 4.81e-15 | 9 |
arterial system endothelium | 4.81e-15 | 9 |
endothelium of artery | 4.81e-15 | 9 |
anatomical conduit | 5.63e-15 | 240 |
splanchnic layer of lateral plate mesoderm | 5.81e-15 | 83 |
tube | 3.42e-14 | 192 |
circulatory system | 9.73e-13 | 112 |
cardiovascular system | 3.70e-12 | 109 |
adult organism | 1.65e-11 | 114 |
vein | 2.02e-10 | 9 |
venous blood vessel | 2.02e-10 | 9 |
venous system | 2.02e-10 | 9 |
epithelial tube | 1.42e-09 | 117 |
epithelium | 3.96e-09 | 306 |
cell layer | 6.29e-09 | 309 |
aorta | 6.35e-09 | 21 |
aortic system | 6.35e-09 | 21 |
artery | 5.11e-08 | 42 |
arterial blood vessel | 5.11e-08 | 42 |
arterial system | 5.11e-08 | 42 |