UBERON:0001638
From FANTOM5_SSTAR
Name: | vein | |
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Namespace: | FANTOM | |
Definition: | "Any of the tubular branching vessels that carry blood from the capillaries toward the heart." [Wikipedia:Vein] | |
Xrefs: |
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Synonyms: |
"vena" RELATED LATIN [Wikipedia:Vein] "venous subtree" BROAD [] "venous tree organ part" EXACT [] "venous vessel" BROAD [] | |
Comments: | TODO - check with MA - vein vs venous blood vessel | |
Alt_id: | UBERON:FMA_50723-MA_0000066-MA_0000067-MIAA_0000037-XAO_0000115-ZFA_0000082 | |
Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0003920(venous blood vessel) |
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Children
is a: | UBERON:0002066 (umbilical vein) |
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derives from: | FF:0010191 (human vein - adult sample) |
part of: | CL:0002543 (vein endothelial cell) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10191-103E2 (vein, adult)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11267-116G7 (Endothelial Cells - Vein, donor1)
- 11324-117E1 (Endothelial Cells - Umbilical vein, donor2)
- 11344-117G3 (Endothelial Cells - Vein, donor2)
- 11400-118D5 (Endothelial Cells - Umbilical vein, donor3)
- 11416-118F3 (Endothelial Cells - Vein, donor3)
- 11541-120B2 (Smooth Muscle Cells - Umbilical Vein, donor1)
- 11621-122B1 (Smooth Muscle Cells - Umbilical Vein, donor2)
- 11702-123B1 (Smooth Muscle Cells - Umbilical Vein, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001638 (vein), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
Property "Property value" (as page type) with input value "UBPROP:0000001 "Part of the circulatory system composed of blood vessels which carry blood from other organs, tissues, and cells to the heart.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.