FFCP PHASE1:Hg19::chr1:236917125..236917203,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:236917125..236917203,+ to FFCP PHASE1:Hg19::chr1:236917125..236917203,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=88 | |EntrezGene=88 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=164 | |HGNC=164 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000461367_5end | |||
|cluster_id=chr1:236917125..236917203,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_ACTN2_5end | |||
|id=chr1:236917125..236917203,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.22e-16;82 | |||
|ontology_enrichment_disease=DOID:3095!1.04e-07!22;DOID:2994!1.04e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.52e-50!57;UBERON:0005068!2.52e-50!57;UBERON:0006241!2.52e-50!57;UBERON:0007135!2.52e-50!57;UBERON:0001017!1.52e-46!82;UBERON:0005743!1.00e-43!86;UBERON:0002780!2.85e-43!41;UBERON:0001890!2.85e-43!41;UBERON:0006240!2.85e-43!41;UBERON:0002616!3.08e-43!59;UBERON:0003080!5.12e-42!42;UBERON:0000073!6.83e-42!94;UBERON:0001016!6.83e-42!94;UBERON:0000955!1.96e-41!69;UBERON:0006238!1.96e-41!69;UBERON:0007023!9.94e-38!115;UBERON:0001893!4.60e-35!34;UBERON:0001869!7.86e-35!32;UBERON:0003075!1.34e-34!86;UBERON:0007284!1.34e-34!86;UBERON:0002346!4.57e-34!90;UBERON:0002791!3.29e-33!33;UBERON:0002020!3.45e-32!34;UBERON:0003528!3.45e-32!34;UBERON:0002619!1.54e-27!22;UBERON:0003056!5.92e-26!61;UBERON:0001950!5.04e-24!20;UBERON:0000956!1.10e-23!25;UBERON:0000203!1.10e-23!25;UBERON:0000924!2.35e-23!173;UBERON:0006601!2.35e-23!173;UBERON:0004121!2.93e-23!169;UBERON:0000033!4.01e-19!123;UBERON:0000153!1.14e-17!129;UBERON:0007811!1.14e-17!129;UBERON:0000025!2.07e-16!194;UBERON:0000200!1.74e-13!6;UBERON:0004111!2.05e-10!241;UBERON:0002308!6.90e-10!9;UBERON:0000125!6.90e-10!9;UBERON:0002420!8.07e-10!9;UBERON:0007245!8.07e-10!9;UBERON:0010009!8.07e-10!9;UBERON:0010011!8.07e-10!9;UBERON:0000454!8.07e-10!9;UBERON:0003076!1.16e-09!15;UBERON:0003057!1.16e-09!15;UBERON:0009663!1.39e-09!7;UBERON:0001894!1.57e-09!7;UBERON:0006222!1.57e-09!7;UBERON:0003296!2.25e-08!4;UBERON:0010133!2.25e-08!4;UBERON:0000064!2.82e-08!219;UBERON:0000483!4.45e-08!309;UBERON:0000369!4.48e-08!4;UBERON:0002435!4.48e-08!4;UBERON:0000204!4.48e-08!4;UBERON:0010082!4.48e-08!4;UBERON:0000119!7.29e-08!312;UBERON:0004733!7.89e-08!12;UBERON:0002028!7.89e-08!12;UBERON:0007277!7.89e-08!12;UBERON:0002021!9.78e-08!5;UBERON:0001872!1.01e-07!5;UBERON:0000477!1.06e-07!286;UBERON:0002771!1.75e-07!3;UBERON:0004732!3.97e-07!13;UBERON:0000349!4.53e-07!5;UBERON:0001896!5.30e-07!3;UBERON:0005290!5.30e-07!3;UBERON:0010096!5.30e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.89e-54;22!UBERON:0001869;7.27e-50;32!UBERON:0000956;2.98e-47;25!UBERON:0000203;2.98e-47;25!UBERON:0001950;2.02e-46;20!UBERON:0001893;1.15e-45;34!UBERON:0003528;2.73e-45;34!UBERON:0002020;2.73e-45;34!UBERON:0002791;1.95e-44;32!UBERON:0002780;7.99e-36;41!UBERON:0001890;7.99e-36;41!UBERON:0000073;9.74e-34;53!UBERON:0002616;9.74e-34;53!UBERON:0000955;1.47e-29;68!UBERON:0000200;2.91e-27;6!UBERON:0001017;1.56e-25;75!UBERON:0002298;5.98e-18;6!UBERON:0004733;1.10e-16;12!UBERON:0002028;1.10e-16;12!UBERON:0001016;3.79e-16;83!UBERON:0002021;2.38e-15;5!UBERON:0004732;2.47e-15;13!UBERON:0001872;2.51e-15;5!UBERON:0001870;1.75e-14;3!UBERON:0001896;2.65e-13;3!UBERON:0005290;2.65e-13;3!UBERON:0007023;3.63e-12;114!UBERON:0002771;3.92e-10;2!UBERON:0002702;4.10e-10;2!UBERON:0001954;1.20e-09;2!UBERON:0003022;1.20e-09;2!UBERON:0002421;1.20e-09;2!UBERON:0002600;1.20e-09;2!UBERON:0001905;1.81e-09;2!UBERON:0002757;1.81e-09;2!UBERON:0010134;1.81e-09;2!UBERON:0005408;1.81e-09;2!UBERON:0001899;1.81e-09;2!UBERON:0000349;1.89e-08;5!UBERON:0011216;6.27e-08;132!UBERON:0002680;6.38e-08;9!UBERON:0001895;6.38e-08;9!UBERON:0000125;1.04e-07;9!UBERON:0002308;1.04e-07;9!UBERON:0000988;6.01e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.24e-67,53;UBERON:0002616,1.24e-67,53;UBERON:0001049,1.05e-63,56;UBERON:0005068,1.05e-63,56;UBERON:0006241,1.05e-63,56;UBERON:0007135,1.05e-63,56;UBERON:0000955,2.73e-62,68;UBERON:0006238,2.73e-62,68;UBERON:0001869,7.84e-56,32;UBERON:0001017,7.78e-55,81;UBERON:0002619,6.30e-54,22;UBERON:0001893,2.40e-52,34;UBERON:0003528,5.19e-52,34;UBERON:0002020,5.19e-52,34;UBERON:0002780,1.64e-51,41;UBERON:0001890,1.64e-51,41;UBERON:0003080,1.64e-51,41;UBERON:0006240,1.64e-51,41;UBERON:0002791,2.45e-50,32;UBERON:0001016,1.00e-48,89;UBERON:0000956,3.17e-47,25;UBERON:0000203,3.17e-47,25;UBERON:0001950,2.12e-46,20;UBERON:0003075,1.29e-44,82;UBERON:0007284,1.29e-44,82;UBERON:0002346,3.09e-42,86;UBERON:0007023,2.37e-40,114;UBERON:0010371,2.83e-36,104;UBERON:0003056,4.43e-33,61;UBERON:0000200,2.84e-27,6;UBERON:0010314,4.15e-27,132;UBERON:0004121,1.82e-25,171;UBERON:0000924,1.82e-25,171;UBERON:0006601,1.82e-25,171;UBERON:0002298,6.55e-18,6;UBERON:0011216,1.23e-17,223;UBERON:0000025,1.25e-17,192;UBERON:0004733,1.12e-16,12;UBERON:0002028,1.12e-16,12;UBERON:0007277,1.12e-16,12;UBERON:0002021,2.38e-15,5;UBERON:0004732,2.53e-15,13;UBERON:0001872,2.56e-15,5;UBERON:0001870,1.84e-14,3;UBERON:0001896,2.71e-13,3;UBERON:0005290,2.71e-13,3;UBERON:0010096,2.71e-13,3;UBERON:0003076,3.70e-13,15;UBERON:0003057,3.70e-13,15;UBERON:0004111,1.20e-12,240;UBERON:0002771,3.83e-10,2;UBERON:0002702,4.20e-10,2;UBERON:0001954,1.22e-09,2;UBERON:0003022,1.22e-09,2;UBERON:0002421,1.22e-09,2;UBERON:0002600,1.22e-09,2;UBERON:0001905,1.59e-09,2;UBERON:0002757,1.59e-09,2;UBERON:0010134,1.59e-09,2;UBERON:0005408,1.59e-09,2;UBERON:0001899,1.59e-09,2;UBERON:0000483,3.67e-09,306;UBERON:0000119,5.31e-09,309;UBERON:0000349,1.91e-08,5;UBERON:0002680,6.44e-08,9;UBERON:0001895,6.44e-08,9;UBERON:0010092,6.44e-08,9;UBERON:0000125,1.14e-07,9;UBERON:0002308,1.14e-07,9;UBERON:0000988,6.37e-07,3 | |||
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| ||
|short_description=p2@ACTN2 | |||
}} | }} |
Latest revision as of 14:48, 16 September 2015
Short description: | p2@ACTN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ACTN2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000461367_5end |
EntrezGene: | ACTN2 |
HGNC: | 164 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data