FFCP PHASE1:Hg19::chr1:236917269..236917280,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=88 | |EntrezGene=88 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=164 | |HGNC=164 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=70bp_to_ENST00000461367_5end | |association_with_transcript=70bp_to_ENST00000461367_5end | ||
|cluster_id=chr1:236917269..236917280,+ | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_13_at_ACTN2_5end | |description=CAGE_peak_13_at_ACTN2_5end | ||
|id=chr1:236917269..236917280,+ | |id=chr1:236917269..236917280,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;3.99e-50;1!UBERON:0003104;1.13e-07;31 | |||
|ontology_enrichment_disease=DOID:114!1.12e-11!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.66e-36!115;UBERON:0002020!6.13e-32!34;UBERON:0003528!6.13e-32!34;UBERON:0001869!8.72e-30!32;UBERON:0002791!8.16e-29!33;UBERON:0001893!6.72e-28!34;UBERON:0001049!2.78e-26!57;UBERON:0005068!2.78e-26!57;UBERON:0006241!2.78e-26!57;UBERON:0007135!2.78e-26!57;UBERON:0002780!4.03e-26!41;UBERON:0001890!4.03e-26!41;UBERON:0006240!4.03e-26!41;UBERON:0001950!7.61e-26!20;UBERON:0003080!1.97e-25!42;UBERON:0002616!2.89e-25!59;UBERON:0002619!2.05e-23!22;UBERON:0000955!3.38e-23!69;UBERON:0006238!3.38e-23!69;UBERON:0002346!2.29e-21!90;UBERON:0000956!1.80e-20!25;UBERON:0000203!1.80e-20!25;UBERON:0003075!2.61e-20!86;UBERON:0007284!2.61e-20!86;UBERON:0001017!6.45e-19!82;UBERON:0005743!7.43e-18!86;UBERON:0003056!1.42e-16!61;UBERON:0000073!8.67e-16!94;UBERON:0001016!8.67e-16!94;UBERON:0002420!1.99e-13!9;UBERON:0007245!1.99e-13!9;UBERON:0010009!1.99e-13!9;UBERON:0010011!1.99e-13!9;UBERON:0000454!1.99e-13!9;UBERON:0002308!2.10e-13!9;UBERON:0000125!2.10e-13!9;UBERON:0000033!1.02e-12!123;UBERON:0000924!3.63e-12!173;UBERON:0006601!3.63e-12!173;UBERON:0000153!6.31e-12!129;UBERON:0007811!6.31e-12!129;UBERON:0000369!1.66e-11!4;UBERON:0002435!1.66e-11!4;UBERON:0000204!1.66e-11!4;UBERON:0010082!1.66e-11!4;UBERON:0009663!2.40e-11!7;UBERON:0004121!2.44e-11!169;UBERON:0007100!3.28e-11!27;UBERON:0001871!6.06e-10!7;UBERON:0002021!1.51e-09!5;UBERON:0000025!2.22e-09!194;UBERON:0004151!3.29e-08!3;UBERON:0003978!5.93e-08!3;UBERON:0009751!5.93e-08!3;UBERON:0000946!5.93e-08!3;UBERON:0002523!5.93e-08!3;UBERON:0005983!5.93e-08!3;UBERON:0002165!5.93e-08!3;UBERON:0002062!5.93e-08!3;UBERON:0007280!5.93e-08!3;UBERON:0000988!7.28e-08!3;UBERON:0000064!8.31e-08!219;UBERON:0000200!8.47e-08!6;UBERON:0005383!1.69e-07!3;UBERON:0005382!1.69e-07!3;UBERON:0002771!1.99e-07!3;UBERON:0004111!2.09e-07!241;UBERON:0005418!7.49e-07!1;UBERON:0001389!7.49e-07!1;UBERON:0000026!7.49e-07!1;UBERON:0008784!7.49e-07!1;UBERON:0006058!7.49e-07!1;UBERON:0003663!7.49e-07!1;UBERON:0001383!7.49e-07!1;UBERON:0004256!7.49e-07!1;UBERON:0002529!7.49e-07!1;UBERON:0004708!7.49e-07!1;UBERON:0002101!7.49e-07!1;UBERON:0004709!7.49e-07!1;UBERON:0003661!7.49e-07!1;UBERON:0002471!7.49e-07!1;UBERON:0004357!7.49e-07!1;UBERON:0009872!7.49e-07!1;UBERON:0004347!7.49e-07!1;UBERON:0005420!7.49e-07!1;UBERON:0005732!7.49e-07!1;UBERON:0006057!7.49e-07!1;UBERON:0000978!7.49e-07!1;UBERON:0002103!7.49e-07!1;UBERON:0001665!7.49e-07!1;UBERON:0003823!7.49e-07!1;UBERON:0000154!7.49e-07!1;UBERON:0005733!7.49e-07!1;UBERON:0005730!7.49e-07!1;UBERON:0002079!7.90e-07!1;UBERON:0002084!9.81e-07!1;UBERON:0002082!9.81e-07!1;UBERON:0004706!9.81e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;1.46e-50;1!UBERON:0000026;1.46e-50;1!UBERON:0008784;1.46e-50;1!UBERON:0006058;1.46e-50;1!UBERON:0003663;1.46e-50;1!UBERON:0004256;1.46e-50;1!UBERON:0004708;1.46e-50;1!UBERON:0002101;1.46e-50;1!UBERON:0004709;1.46e-50;1!UBERON:0002529;1.46e-50;1!UBERON:0010538;1.46e-50;1!UBERON:0003661;1.46e-50;1!UBERON:0010890;1.46e-50;1!UBERON:0002471;1.46e-50;1!UBERON:0001383;1.46e-50;1!UBERON:0010758;1.46e-50;1!UBERON:0010707;1.46e-50;1!UBERON:0000978;1.46e-50;1!UBERON:0002103;1.46e-50;1!UBERON:0001665;1.46e-50;1!UBERON:0003823;1.46e-50;1!UBERON:0000154;1.46e-50;1!UBERON:0010709;1.46e-50;1!UBERON:0002079;3.99e-50;1!UBERON:0005090;4.32e-26;2!UBERON:0001630;4.32e-26;2!UBERON:0002081;7.14e-26;2!UBERON:0000988;9.45e-18;3!UBERON:0004151;9.45e-18;3!UBERON:0001134;1.83e-13;16!UBERON:0002036;1.83e-13;16!UBERON:0002298;1.44e-09;6!UBERON:0002385;1.13e-07;31!UBERON:0001015;1.13e-07;31!UBERON:0000383;1.13e-07;31!UBERON:0002680;8.37e-07;9!UBERON:0001895;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.46e-50,1;UBERON:0001389,1.46e-50,1;UBERON:0000026,1.46e-50,1;UBERON:0008784,1.46e-50,1;UBERON:0006058,1.46e-50,1;UBERON:0003663,1.46e-50,1;UBERON:0004256,1.46e-50,1;UBERON:0004708,1.46e-50,1;UBERON:0002101,1.46e-50,1;UBERON:0004709,1.46e-50,1;UBERON:0002529,1.46e-50,1;UBERON:0010538,1.46e-50,1;UBERON:0003661,1.46e-50,1;UBERON:0010890,1.46e-50,1;UBERON:0002471,1.46e-50,1;UBERON:0001383,1.46e-50,1;UBERON:0004357,1.46e-50,1;UBERON:0004347,1.46e-50,1;UBERON:0005420,1.46e-50,1;UBERON:0005732,1.46e-50,1;UBERON:0010758,1.46e-50,1;UBERON:0010707,1.46e-50,1;UBERON:0000978,1.46e-50,1;UBERON:0002103,1.46e-50,1;UBERON:0001665,1.46e-50,1;UBERON:0003823,1.46e-50,1;UBERON:0000154,1.46e-50,1;UBERON:0010709,1.46e-50,1;UBERON:0005733,1.46e-50,1;UBERON:0005730,1.46e-50,1;UBERON:0002079,2.42e-50,1;UBERON:0005090,4.32e-26,2;UBERON:0001630,4.32e-26,2;UBERON:0002081,5.56e-26,2;UBERON:0010227,5.56e-26,2;UBERON:0004151,8.00e-18,3;UBERON:0000988,9.46e-18,3;UBERON:0002298,1.44e-09,6;UBERON:0002680,8.37e-07,9;UBERON:0001895,8.37e-07,9;UBERON:0010092,8.37e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,0,0.399358000997982,0.858452096273142,0.446342914883745,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,1.2914249265598,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.47428837187895,0.615976841137482,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653150243690884,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,0,0.399358000997982,0.858452096273142,0.446342914883745,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,1.2914249265598,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.47428837187895,0.615976841137482,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653150243690884,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p13@ACTN2 | |short_description=p13@ACTN2 | ||
}} | }} |
Latest revision as of 14:50, 16 September 2015
Short description: | p13@ACTN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ACTN2_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 70bp_to_ENST00000461367_5end |
EntrezGene: | ACTN2 |
HGNC: | 164 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data