FFCP PHASE1:Hg19::chr10:119000578..119000589,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6571 | |EntrezGene=6571 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10935 | |HGNC=10935 | ||
|TSSclassifier=strong | |||
|UniProt=Q05940 | |UniProt=Q05940 | ||
|association_with_transcript=0bp_to_NM_003054_5end | |association_with_transcript=0bp_to_NM_003054_5end | ||
|cluster_id=chr10:119000578..119000589,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_4_at_SLC18A2_5end | |description=CAGE_peak_4_at_SLC18A2_5end | ||
|id=chr10:119000578..119000589,+ | |id=chr10:119000578..119000589,+ | ||
|ontology_enrichment_celltype=CL:0002274!2.82e-15!5;CL:0000457!2.82e-15!5;CL:0002191!2.82e-15!5;CL:0000097!2.82e-15!5;CL:0000831!2.82e-15!5;CL:0002028!2.82e-15!5;CL:0000451!1.85e-11!10;CL:0000784!3.96e-09!3;CL:0000453!5.26e-09!5;CL:0000163!3.01e-08!9;CL:0000990!1.79e-07!8;CL:0001014!4.62e-07!2;CL:0001016!4.62e-07!2 | |ontology_enrichment_celltype=CL:0002274!2.82e-15!5;CL:0000457!2.82e-15!5;CL:0002191!2.82e-15!5;CL:0000097!2.82e-15!5;CL:0000831!2.82e-15!5;CL:0002028!2.82e-15!5;CL:0000451!1.85e-11!10;CL:0000784!3.96e-09!3;CL:0000453!5.26e-09!5;CL:0000163!3.01e-08!9;CL:0000990!1.79e-07!8;CL:0001014!4.62e-07!2;CL:0001016!4.62e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.01e-59;5!CL:0000163;2.98e-33;9!CL:0001014;9.57e-25;2!CL:0001016;9.57e-25;2!CL:0000453;1.73e-10;5!CL:0000451;3.19e-10;10!CL:0000840;6.91e-09;5!CL:0000151;1.02e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.07e-59,5;CL:0002028,1.07e-59,5;CL:0000163,3.08e-33,9;CL:0001014,9.02e-25,2;CL:0001016,9.02e-25,2;CL:0000763,5.04e-14,108;CL:0000049,5.04e-14,108;CL:0000037,8.50e-12,168;CL:0000988,4.19e-11,177;CL:0002032,1.48e-10,161;CL:0000837,1.48e-10,161;CL:0000453,1.69e-10,5;CL:0000451,3.34e-10,10;CL:0000840,6.77e-09,5;CL:0001029,6.77e-09,5;CL:0000151,2.82e-08,36;CL:0000557,5.19e-08,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8552;4.23e-13;1!DOID:9119;7.68e-13;1!DOID:8692;5.73e-09;31!DOID:1036;9.94e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,4.77e-13,1;DOID:9119,6.82e-13,1;DOID:1240,2.35e-10,39;DOID:8692,2.49e-09,31;DOID:2531,7.84e-08,51;DOID:0060083,7.84e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.77e-08!115;UBERON:0000473!5.22e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.69e-07;2!UBERON:0005058;4.69e-07;2!UBERON:0009113;4.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,3.06e-07,93;UBERON:0002371,5.38e-07,76;UBERON:0002390,7.90e-07,98;UBERON:0003061,7.90e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0,0,0,0,0,0,0.880801318004542,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0.393010762749165,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.953962497221368,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91195885475132,8.01240749520357,21.5621240162403,28.9681106368092,26.1321837192606,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0.219259876645935,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0,1.62310970137278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,1.35227839237992,1.33228787199128,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,1.02193298195737,0,2.32696354660219,0,0,0,0,0.794682894901893,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,8.09906009585402,4.6428117273477,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,2.38068310173083,0,0,0,1.32506888912221,0,0.26446520348538,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.323474434190045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0.79062257427272,0,0.150962843566674,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0.250707539292375,0.227336094654718,0.267964130156178,0,0,0.426467963801962,0,0.581300188524055,1.1794195716213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0,0,0,0,0,0,0.880801318004542,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0.393010762749165,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.953962497221368,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91195885475132,8.01240749520357,21.5621240162403,28.9681106368092,26.1321837192606,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0.219259876645935,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0,1.62310970137278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,1.35227839237992,1.33228787199128,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,1.02193298195737,0,2.32696354660219,0,0,0,0,0.794682894901893,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,8.09906009585402,4.6428117273477,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,2.38068310173083,0,0,0,1.32506888912221,0,0.26446520348538,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.323474434190045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0.79062257427272,0,0.150962843566674,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0.250707539292375,0.227336094654718,0.267964130156178,0,0,0.426467963801962,0,0.581300188524055,1.1794195716213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p4@SLC18A2 | |short_description=p4@SLC18A2 | ||
}} | }} |
Latest revision as of 15:15, 16 September 2015
Short description: | p4@SLC18A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC18A2_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 0bp_to_NM_003054_5end |
EntrezGene: | SLC18A2 |
HGNC: | 10935 |
UniProt: | Q05940 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.07e-59 | 5 |
basophil mast progenitor cell | 1.07e-59 | 5 |
endocrine cell | 3.08e-33 | 9 |
CD1a-positive Langerhans cell | 9.02e-25 | 2 |
immature CD1a-positive Langerhans cell | 9.02e-25 | 2 |
myeloid cell | 5.04e-14 | 108 |
common myeloid progenitor | 5.04e-14 | 108 |
hematopoietic stem cell | 8.50e-12 | 168 |
hematopoietic cell | 4.19e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.48e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.48e-10 | 161 |
Langerhans cell | 1.69e-10 | 5 |
dendritic cell | 3.34e-10 | 10 |
immature conventional dendritic cell | 6.77e-09 | 5 |
common dendritic progenitor | 6.77e-09 | 5 |
secretory cell | 2.82e-08 | 36 |
granulocyte monocyte progenitor cell | 5.19e-08 | 67 |
Ontology term | p-value | n |
---|---|---|
immune system | 3.06e-07 | 93 |
bone marrow | 5.38e-07 | 76 |
hematopoietic system | 7.90e-07 | 98 |
blood island | 7.90e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 4.77e-13 | 1 |
acute myeloid leukemia | 6.82e-13 | 1 |
leukemia | 2.35e-10 | 39 |
myeloid leukemia | 2.49e-09 | 31 |
hematologic cancer | 7.84e-08 | 51 |
immune system cancer | 7.84e-08 | 51 |