FFCP PHASE1:Hg19::chr14:93179177..93179188,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:93179177..93179188,-
|short_description=p6@LGMN
|description=CAGE_peak_6_at_LGMN_5end
|association_with_transcript=0bp_to_ENST00000557725_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5641 | |EntrezGene=5641 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9472 | |HGNC=9472 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000557725_5end | |||
|cluster_id=chr14:93179177..93179188,- | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_6_at_LGMN_5end | |||
|id=chr14:93179177..93179188,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.62e-66;6!CL:0002619;1.53e-09;3!CL:0002580;1.53e-09;3!CL:0000473;4.82e-09;39!CL:0000234;4.82e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.67e-66,6;CL:0002194,1.36e-10,59;CL:0000576,1.36e-10,59;CL:0000040,1.36e-10,59;CL:0000559,1.36e-10,59;CL:0002009,2.94e-10,61;CL:0002580,1.54e-09,3;CL:0000839,1.66e-09,66;CL:0002619,1.67e-09,3;CL:0000557,2.27e-09,67;CL:0000766,9.66e-09,72;CL:0000473,9.76e-09,48;CL:0000234,9.76e-09,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!1.83e-07!12;UBERON:0000042!1.83e-07!12 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.69e-08,76;UBERON:0001474,1.04e-07,82;UBERON:0004765,4.83e-07,90;UBERON:0002405,8.02e-07,93 | |||
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| ||
|short_description=p6@LGMN | |||
}} | }} |
Latest revision as of 15:20, 16 September 2015
Short description: | p6@LGMN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LGMN_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | 0bp_to_ENST00000557725_5end |
EntrezGene: | LGMN |
HGNC: | 9472 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.67e-66 | 6 |
monopoietic cell | 1.36e-10 | 59 |
monocyte | 1.36e-10 | 59 |
monoblast | 1.36e-10 | 59 |
promonocyte | 1.36e-10 | 59 |
macrophage dendritic cell progenitor | 2.94e-10 | 61 |
preadipocyte of the breast | 1.54e-09 | 3 |
myeloid lineage restricted progenitor cell | 1.66e-09 | 66 |
adult endothelial progenitor cell | 1.67e-09 | 3 |
granulocyte monocyte progenitor cell | 2.27e-09 | 67 |
myeloid leukocyte | 9.66e-09 | 72 |
defensive cell | 9.76e-09 | 48 |
phagocyte | 9.76e-09 | 48 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.69e-08 | 76 |
bone element | 1.04e-07 | 82 |
skeletal element | 4.83e-07 | 90 |
immune system | 8.02e-07 | 93 |