FFCP PHASE2:Hg19::chr4:16900242..16900317,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:9079 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6533 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9079 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6533 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=E9PFI4,D6RAT1,E7EX95,E9PGU0 | ||
|association_with_transcript=0bp_to_ENST00000502640,ENST00000506732,ENST00000508918,ENST00000510825,ENST00000512345_5end | |association_with_transcript=0bp_to_ENST00000502640,ENST00000506732,ENST00000508918,ENST00000510825,ENST00000512345_5end | ||
|cluster_id=chr4:16900242..16900317,- | |cluster_id=chr4:16900242..16900317,- |
Latest revision as of 15:38, 16 September 2015
Short description: | p1@LDB2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LDB2_5end |
Coexpression cluster: | C1083_lung_uterus_Endothelial_neuroectodermal_spleen_mesenchymal_occipital |
Association with transcript: | 0bp_to_ENST00000502640, ENST00000506732, ENST00000508918, ENST00000510825, ENST00000512345_5end |
EntrezGene: | LDB2 |
HGNC: | 6533 |
UniProt: | E9PFI4D6RAT1E7EX95E9PGU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@LDB2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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endothelial cell of vascular tree | 2.92e-14 | 24 |
endothelial cell | 2.96e-12 | 36 |
blood vessel endothelial cell | 1.60e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.60e-10 | 18 |
meso-epithelial cell | 3.64e-09 | 45 |
fibroblast | 2.00e-07 | 76 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
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adult organism | 2.17e-27 | 114 |
regional part of forebrain | 3.76e-19 | 41 |
forebrain | 3.76e-19 | 41 |
anterior neural tube | 3.76e-19 | 41 |
future forebrain | 3.76e-19 | 41 |
central nervous system | 6.20e-19 | 81 |
cerebral hemisphere | 2.72e-18 | 32 |
nervous system | 4.25e-18 | 89 |
telencephalon | 4.33e-18 | 34 |
neural tube | 7.62e-18 | 56 |
Showing 1 to 10 of 53 entries