FFCP PHASE1:Hg19::chr9:139965000..139965028,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=89958 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28055 | |||
|TSSclassifier=strong | |||
|UniProt=Q86UD0 | |||
|association_with_transcript=0bp_to_NM_178448,uc011men.1_5end | |||
|cluster_id=chr9:139965000..139965028,- | |||
|coexpression_cluster_id=C281 | |||
|description=CAGE_peak_1_at_C9orf140_5end | |||
|id=chr9:139965000..139965028,- | |||
|ontology_enrichment_celltype=CL:0000066!7.36e-23!254;CL:0000076!4.75e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:1000497;6.33e-08;17!CL:0002518;6.33e-08;17!CL:1000449;2.66e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.55e-24,253;CL:1000497,6.01e-08,17;CL:0002518,6.01e-08,17;CL:1000449,2.52e-07,15;CL:0000076,6.37e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.25e-48!235;DOID:14566!1.21e-45!239;DOID:0050687!4.95e-26!143;DOID:0050686!7.50e-26!137;DOID:305!1.51e-23!106;DOID:2531!1.91e-19!51;DOID:0060083!1.91e-19!51;DOID:1240!1.66e-16!39;DOID:8692!8.44e-14!31;DOID:7!2.43e-08!39;DOID:299!6.68e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.30e-14;31!DOID:1240;1.38e-13;39!DOID:2531;2.33e-12;51!DOID:0060083;2.33e-12;51!DOID:305;3.27e-08;106!DOID:0050687;1.38e-07;143!DOID:299;2.50e-07;25!DOID:7;7.18e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.02e-50,235;DOID:14566,8.25e-47,239;DOID:0050687,2.23e-27,143;DOID:0050686,2.82e-26,137;DOID:305,1.40e-24,106;DOID:2531,3.76e-20,51;DOID:0060083,3.76e-20,51;DOID:1240,4.28e-17,39;DOID:8692,2.78e-14,31;DOID:7,1.50e-08,39;DOID:299,4.10e-07,25 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.25e-08;24!UBERON:0011143;2.25e-08;24!UBERON:0006555;2.66e-07;15!UBERON:0004819;2.66e-07;15!UBERON:0001285;2.66e-07;15!UBERON:0007684;2.66e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,2.52e-07,15;UBERON:0009773,2.52e-07,15;UBERON:0001231,2.52e-07,15;UBERON:0001285,2.52e-07,15;UBERON:0007684,2.52e-07,15;UBERON:0004208,2.52e-07,15;UBERON:0002113,8.19e-07,26;UBERON:0003918,8.19e-07,26;UBERON:0011143,8.19e-07,26;UBERON:0005095,8.19e-07,26;UBERON:0007687,8.19e-07,26 | |||
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| |||
|short_description=p1@C9orf140 | |||
}} |
Latest revision as of 15:39, 16 September 2015
Short description: | p1@C9orf140 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C9orf140_5end |
Coexpression cluster: | C281_Hodgkin_Reticulocytes_chronic_NK_acute_retinoblastoma_small |
Association with transcript: | 0bp_to_NM_178448, uc011men.1_5end |
EntrezGene: | C9orf140 |
HGNC: | 28055 |
UniProt: | Q86UD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.55e-24 | 253 |
kidney cell | 6.01e-08 | 17 |
kidney epithelial cell | 6.01e-08 | 17 |
epithelial cell of nephron | 2.52e-07 | 15 |
squamous epithelial cell | 6.37e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 2.52e-07 | 15 |
renal tubule | 2.52e-07 | 15 |
nephron tubule | 2.52e-07 | 15 |
nephron | 2.52e-07 | 15 |
uriniferous tubule | 2.52e-07 | 15 |
nephrogenic mesenchyme | 2.52e-07 | 15 |
kidney | 8.19e-07 | 26 |
kidney mesenchyme | 8.19e-07 | 26 |
upper urinary tract | 8.19e-07 | 26 |
kidney rudiment | 8.19e-07 | 26 |
kidney field | 8.19e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.02e-50 | 235 |
disease of cellular proliferation | 8.25e-47 | 239 |
cell type cancer | 2.23e-27 | 143 |
organ system cancer | 2.82e-26 | 137 |
carcinoma | 1.40e-24 | 106 |
hematologic cancer | 3.76e-20 | 51 |
immune system cancer | 3.76e-20 | 51 |
leukemia | 4.28e-17 | 39 |
myeloid leukemia | 2.78e-14 | 31 |
disease of anatomical entity | 1.50e-08 | 39 |
adenocarcinoma | 4.10e-07 | 25 |