FFCP PHASE1:Hg19::chr1:13840483..13840521,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126755 | |EntrezGene=126755 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27005 | |HGNC=27005 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VT99 | |UniProt=Q5VT99 | ||
|association_with_transcript=21bp_to_ENST00000376085_5end | |association_with_transcript=21bp_to_ENST00000376085_5end | ||
|cluster_id=chr1:13840483..13840521,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_1_at_LRRC38_5end | |description=CAGE_peak_1_at_LRRC38_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.78e-07;2!CL:0000242;1.78e-07;2 | |ontology_enrichment_celltype_v019=CL:0000123;1.78e-07;2!CL:0000242;1.78e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.09e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.03e-08;82 | |ontology_enrichment_development_v019=UBERON:0006601;3.03e-08;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;2.99e-10;20!UBERON:0004151;1.43e-09;3!UBERON:0002619;3.21e-09;22!UBERON:0001905;2.46e-08;2!UBERON:0002757;2.46e-08;2!UBERON:0010134;2.46e-08;2!UBERON:0005408;2.46e-08;2!UBERON:0001899;2.46e-08;2!UBERON:0005090;3.02e-08;2!UBERON:0001630;3.02e-08;2!UBERON:0000956;5.68e-08;25!UBERON:0000203;5.68e-08;25!UBERON:0000341;6.49e-08;2!UBERON:0002370;7.55e-08;2!UBERON:0005058;7.55e-08;2!UBERON:0009113;7.55e-08;2!UBERON:0001869;2.44e-07;32!UBERON:0002133;3.60e-07;2!UBERON:0002081;6.32e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001950;2.99e-10;20!UBERON:0004151;1.43e-09;3!UBERON:0002619;3.21e-09;22!UBERON:0001905;2.46e-08;2!UBERON:0002757;2.46e-08;2!UBERON:0010134;2.46e-08;2!UBERON:0005408;2.46e-08;2!UBERON:0001899;2.46e-08;2!UBERON:0005090;3.02e-08;2!UBERON:0001630;3.02e-08;2!UBERON:0000956;5.68e-08;25!UBERON:0000203;5.68e-08;25!UBERON:0000341;6.49e-08;2!UBERON:0002370;7.55e-08;2!UBERON:0005058;7.55e-08;2!UBERON:0009113;7.55e-08;2!UBERON:0001869;2.44e-07;32!UBERON:0002133;3.60e-07;2!UBERON:0002081;6.32e-07;2 | ||
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|short_description=p1@LRRC38 | |short_description=p1@LRRC38 | ||
}} | }} |
Latest revision as of 15:41, 16 September 2015
Short description: | p1@LRRC38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRRC38_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 21bp_to_ENST00000376085_5end |
EntrezGene: | LRRC38 |
HGNC: | 27005 |
UniProt: | Q5VT99 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.09e-07 | 2 |