FFCP PHASE1:Hg19::chr3:170075357..170075368,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6498 | |EntrezGene=6498 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10897 | |HGNC=10897 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-97bp_to_ENST00000477216_5end | |association_with_transcript=-97bp_to_ENST00000477216_5end | ||
|cluster_id=chr3:170075357..170075368,+ | |||
|description=CAGE_peak_3_at_SKIL_5end | |description=CAGE_peak_3_at_SKIL_5end | ||
|id=chr3:170075357..170075368,+ | |id=chr3:170075357..170075368,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.05e-09;10!UBERON:0005564;5.05e-09;10!UBERON:0006603;4.30e-08;65 | |||
|ontology_enrichment_disease=DOID:0050687!1.79e-10!143;DOID:305!8.48e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.92e-19!115;UBERON:0002346!2.76e-13!90;UBERON:0003075!6.89e-13!86;UBERON:0007284!6.89e-13!86;UBERON:0000073!2.77e-12!94;UBERON:0001016!2.77e-12!94;UBERON:0001017!3.32e-12!82;UBERON:0002780!3.41e-12!41;UBERON:0001890!3.41e-12!41;UBERON:0006240!3.41e-12!41;UBERON:0003080!3.87e-12!42;UBERON:0005743!4.07e-12!86;UBERON:0001049!6.04e-12!57;UBERON:0005068!6.04e-12!57;UBERON:0006241!6.04e-12!57;UBERON:0007135!6.04e-12!57;UBERON:0001893!3.03e-11!34;UBERON:0001869!3.98e-11!32;UBERON:0003056!5.58e-11!61;UBERON:0002020!8.74e-11!34;UBERON:0003528!8.74e-11!34;UBERON:0002791!9.46e-11!33;UBERON:0000955!1.23e-09!69;UBERON:0006238!1.23e-09!69;UBERON:0002616!3.14e-09!59;UBERON:0000924!5.87e-09!173;UBERON:0006601!5.87e-09!173;UBERON:0000956!1.18e-08!25;UBERON:0000203!1.18e-08!25;UBERON:0004121!1.43e-08!169;UBERON:0001950!2.40e-08!20;UBERON:0002619!2.77e-08!22;UBERON:0000153!4.98e-08!129;UBERON:0007811!4.98e-08!129;UBERON:0000033!7.50e-08!123;UBERON:0000062!9.31e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.72e-10;32!UBERON:0001893;1.06e-09;34!UBERON:0000922;1.47e-09;49!UBERON:0001950;6.21e-09;20!UBERON:0002791;8.05e-09;32!UBERON:0002780;1.02e-08;41!UBERON:0001890;1.02e-08;41!UBERON:0003528;1.76e-08;34!UBERON:0002020;1.76e-08;34!UBERON:0000956;5.90e-08;25!UBERON:0000203;5.90e-08;25!UBERON:0002619;1.09e-07;22!UBERON:0003135;6.36e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.83e-20,114;UBERON:0001017,1.26e-13,81;UBERON:0001016,4.37e-13,89;UBERON:0002780,1.38e-12,41;UBERON:0001890,1.38e-12,41;UBERON:0003080,1.38e-12,41;UBERON:0006240,1.38e-12,41;UBERON:0003056,2.06e-12,61;UBERON:0002346,7.21e-12,86;UBERON:0003075,8.77e-12,82;UBERON:0007284,8.77e-12,82;UBERON:0000073,1.20e-11,53;UBERON:0002616,1.20e-11,53;UBERON:0001049,2.08e-11,56;UBERON:0005068,2.08e-11,56;UBERON:0006241,2.08e-11,56;UBERON:0007135,2.08e-11,56;UBERON:0001869,3.26e-11,32;UBERON:0001893,4.07e-11,34;UBERON:0000955,1.19e-10,68;UBERON:0006238,1.19e-10,68;UBERON:0003528,5.66e-10,34;UBERON:0002020,5.66e-10,34;UBERON:0002791,5.72e-10,32;UBERON:0010314,8.59e-10,132;UBERON:0004121,1.38e-09,171;UBERON:0000924,1.38e-09,171;UBERON:0006601,1.38e-09,171;UBERON:0001950,3.06e-09,20;UBERON:0011216,8.38e-09,223;UBERON:0010371,1.54e-08,104;UBERON:0000956,3.34e-08,25;UBERON:0000203,3.34e-08,25;UBERON:0002619,5.84e-08,22;UBERON:0003135,3.02e-07,11 | |||
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| ||
|short_description=p3@SKIL | |short_description=p3@SKIL | ||
}} | }} |
Latest revision as of 15:57, 16 September 2015
Short description: | p3@SKIL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SKIL_5end |
Coexpression cluster: | NA |
Association with transcript: | -97bp_to_ENST00000477216_5end |
EntrezGene: | SKIL |
HGNC: | 10897 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data