FFCP PHASE1:Hg19::chr12:118499150..118499161,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:118499150..118499161,- to FFCP PHASE1:Hg19::chr12:118499150..118499161,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55884 | |EntrezGene=55884 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19222 | |HGNC=19222 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NYS7 | |UniProt=Q9NYS7 | ||
|association_with_transcript=-155bp_to_ENST00000315436_5end | |||
|cluster_id=chr12:118499150..118499161,- | |||
|description=CAGE_peak_3_at_WSB2_5end | |||
|id=chr12:118499150..118499161,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!1.44e-13!86;UBERON:0007284!1.44e-13!86;UBERON:0002346!6.13e-13!90;UBERON:0005743!1.18e-12!86;UBERON:0001049!1.69e-12!57;UBERON:0005068!1.69e-12!57;UBERON:0006241!1.69e-12!57;UBERON:0007135!1.69e-12!57;UBERON:0000025!4.45e-12!194;UBERON:0001017!5.00e-12!82;UBERON:0001869!5.55e-12!32;UBERON:0000073!1.37e-11!94;UBERON:0001016!1.37e-11!94;UBERON:0002780!2.01e-11!41;UBERON:0001890!2.01e-11!41;UBERON:0006240!2.01e-11!41;UBERON:0001893!2.17e-11!34;UBERON:0000956!2.26e-11!25;UBERON:0000203!2.26e-11!25;UBERON:0002616!2.51e-11!59;UBERON:0002020!5.63e-11!34;UBERON:0003528!5.63e-11!34;UBERON:0000955!6.52e-11!69;UBERON:0006238!6.52e-11!69;UBERON:0003080!6.64e-11!42;UBERON:0002791!7.15e-11!33;UBERON:0003056!1.25e-10!61;UBERON:0002619!2.68e-10!22;UBERON:0001950!1.78e-09!20;UBERON:0000481!2.10e-09!347;UBERON:0000153!2.57e-09!129;UBERON:0007811!2.57e-09!129;UBERON:0000033!3.63e-09!123;UBERON:0004111!8.92e-09!241;UBERON:0000477!9.31e-09!286;UBERON:0000483!1.33e-08!309;UBERON:0000119!1.72e-08!312;UBERON:0004121!2.72e-07!169;UBERON:0000924!4.18e-07!173;UBERON:0006601!4.18e-07!173;UBERON:0000475!9.00e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.23e-12;25!UBERON:0000203;1.23e-12;25!UBERON:0001869;3.83e-12;32!UBERON:0002619;2.91e-11;22!UBERON:0002791;5.66e-11;32!UBERON:0003528;6.26e-11;34!UBERON:0002020;6.26e-11;34!UBERON:0001893;8.14e-11;34!UBERON:0001950;3.29e-10;20!UBERON:0002780;2.13e-09;41!UBERON:0001890;2.13e-09;41!UBERON:0000073;7.14e-08;53!UBERON:0002616;7.14e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,5.69e-14,82;UBERON:0007284,5.69e-14,82;UBERON:0000073,7.81e-14,53;UBERON:0002616,7.81e-14,53;UBERON:0001049,1.88e-13,56;UBERON:0005068,1.88e-13,56;UBERON:0006241,1.88e-13,56;UBERON:0007135,1.88e-13,56;UBERON:0000025,2.72e-13,192;UBERON:0010314,4.04e-13,132;UBERON:0001869,4.96e-13,32;UBERON:0002346,5.04e-13,86;UBERON:0000956,1.53e-12,25;UBERON:0000203,1.53e-12,25;UBERON:0001017,2.72e-12,81;UBERON:0001893,3.17e-12,34;UBERON:0002780,5.06e-12,41;UBERON:0001890,5.06e-12,41;UBERON:0003080,5.06e-12,41;UBERON:0006240,5.06e-12,41;UBERON:0003528,8.93e-12,34;UBERON:0002020,8.93e-12,34;UBERON:0002791,1.35e-11,32;UBERON:0000955,1.95e-11,68;UBERON:0006238,1.95e-11,68;UBERON:0002619,2.22e-11,22;UBERON:0003056,5.12e-11,61;UBERON:0001950,1.72e-10,20;UBERON:0001016,1.85e-10,89;UBERON:0004111,1.50e-09,240;UBERON:0010371,9.03e-09,104;UBERON:0000483,3.17e-08,306;UBERON:0000119,5.05e-08,309;UBERON:0011216,2.03e-07,223 | |||
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| ||
|short_description=p3@WSB2 | |||
}} | }} |
Latest revision as of 17:08, 16 September 2015
Short description: | p3@WSB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_WSB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -155bp_to_ENST00000315436_5end |
EntrezGene: | WSB2 |
HGNC: | 19222 |
UniProt: | Q9NYS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural plate | 5.69e-14 | 82 |
presumptive neural plate | 5.69e-14 | 82 |
regional part of nervous system | 7.81e-14 | 53 |
regional part of brain | 7.81e-14 | 53 |
neural tube | 1.88e-13 | 56 |
neural rod | 1.88e-13 | 56 |
future spinal cord | 1.88e-13 | 56 |
neural keel | 1.88e-13 | 56 |
tube | 2.72e-13 | 192 |
structure with developmental contribution from neural crest | 4.04e-13 | 132 |
cerebral hemisphere | 4.96e-13 | 32 |
neurectoderm | 5.04e-13 | 86 |
cerebral cortex | 1.53e-12 | 25 |
pallium | 1.53e-12 | 25 |
central nervous system | 2.72e-12 | 81 |
telencephalon | 3.17e-12 | 34 |
regional part of forebrain | 5.06e-12 | 41 |
forebrain | 5.06e-12 | 41 |
anterior neural tube | 5.06e-12 | 41 |
future forebrain | 5.06e-12 | 41 |
brain grey matter | 8.93e-12 | 34 |
gray matter | 8.93e-12 | 34 |
regional part of telencephalon | 1.35e-11 | 32 |
brain | 1.95e-11 | 68 |
future brain | 1.95e-11 | 68 |
regional part of cerebral cortex | 2.22e-11 | 22 |
pre-chordal neural plate | 5.12e-11 | 61 |
neocortex | 1.72e-10 | 20 |
nervous system | 1.85e-10 | 89 |
anatomical conduit | 1.50e-09 | 240 |
ecto-epithelium | 9.03e-09 | 104 |
epithelium | 3.17e-08 | 306 |
cell layer | 5.05e-08 | 309 |
organ system subdivision | 2.03e-07 | 223 |