FFCP PHASE1:Hg19::chr11:129245736..129245758,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8538 | |EntrezGene=8538 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=956 | |HGNC=956 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UMQ3 | |UniProt=Q9UMQ3 | ||
|association_with_transcript=-76bp_to_ENST00000281437_5end | |association_with_transcript=-76bp_to_ENST00000281437_5end | ||
|cluster_id=chr11:129245736..129245758,+ | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_2_at_BARX2_5end | |description=CAGE_peak_2_at_BARX2_5end | ||
|id=chr11:129245736..129245758,+ | |id=chr11:129245736..129245758,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.59e-17!43;CL:0000223!1.36e-14!59;CL:0000066!1.58e-11!254;CL:0002368!2.13e-09!13;CL:0002251!1.14e-08!21 | |ontology_enrichment_celltype=CL:0002076!1.59e-17!43;CL:0000223!1.36e-14!59;CL:0000066!1.58e-11!254;CL:0002368!2.13e-09!13;CL:0002251!1.14e-08!21 | ||
|ontology_enrichment_celltype_v019=CL:0000622;2.84e-09;5!CL:0000154;9.91e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,2.54e-09,5;CL:0000154,9.05e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.70e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:4074;5.72e-07;2!DOID:4905;5.72e-07;2!DOID:3498;5.72e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,6.26e-07,2;DOID:4905,6.26e-07,2;DOID:3498,6.26e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.24e-15!169;UBERON:0000925!2.24e-15!169;UBERON:0006595!2.24e-15!169;UBERON:0001007!1.39e-12!155;UBERON:0001555!1.39e-12!155;UBERON:0007026!1.39e-12!155;UBERON:0007023!8.75e-12!115;UBERON:0000161!8.52e-11!35;UBERON:0004921!2.76e-10!129;UBERON:0004185!2.76e-10!129;UBERON:0000077!1.83e-09!130;UBERON:0001004!2.36e-09!72;UBERON:0000166!1.38e-08!21;UBERON:0002298!4.06e-08!8;UBERON:0000475!7.38e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001041;4.82e-13;14!UBERON:0001044;8.90e-13;6!UBERON:0003293;8.90e-13;6!UBERON:0003294;8.90e-13;6!UBERON:0010047;8.90e-13;6!UBERON:0003408;8.90e-13;6!UBERON:0000167;8.90e-13;6!UBERON:0004921;2.47e-10;33!UBERON:0001829;1.29e-07;2!UBERON:0006562;1.73e-07;2!UBERON:0000165;3.12e-07;28!UBERON:0000341;3.39e-07;2!UBERON:0000161;6.98e-07;19!UBERON:0000166;6.98e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,8.60e-13,6;UBERON:0003293,8.60e-13,6;UBERON:0003294,8.60e-13,6;UBERON:0010047,8.60e-13,6;UBERON:0000167,8.60e-13,6;UBERON:0000166,9.72e-10,22;UBERON:0001041,1.53e-09,87;UBERON:0004921,5.92e-09,118;UBERON:0001007,1.13e-07,145;UBERON:0001555,1.13e-07,145;UBERON:0007026,1.13e-07,145;UBERON:0001829,1.37e-07,2;UBERON:0003408,1.67e-07,10;UBERON:0000341,3.66e-07,2;UBERON:0004119,4.66e-07,160;UBERON:0000925,4.66e-07,160;UBERON:0006595,4.66e-07,160;UBERON:0000165,5.85e-07,29;UBERON:0000930,5.85e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.11332214173056,1.09288586487763,3.70784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54141078213801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.545492241181669,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.368965315629341,0,0.768251997860379,1.1240175325762,0.100528972411631,0.833296006426766,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0,0,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.802025881213139,0.368323955743585,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0.206082023295445,0,0,4.01985876597321,1.30012049207304,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0.495854746082934,0.192190067365106,0.255225424989168,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,4.69211592875051,1.08890984861323,0.564862804660675,0.43050537267123,1.68471475667626,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0.422250816255987,0.796991953004279,0.552567831062295,0,0,0,0,3.41499734359842,0.537063524026827,0,0,0,0,0,0,0,0.7812832832557,0,2.17499872630438,0.341380344856499,1.01701460117107,0.472775363535873,0,0,0,0,0,0,0.110579259931225,0.886642856860642,0.219385397153973,0,1.39423744278603,6.00212016329617,0,0.23056390438806,0.0897576444097721,0.325942115766024,0,0.0915975934018623,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0.611030144933625,135.213634678364,146.793959468445,147.130526853187,0.539209063845416,0,0,0,2.15231080825299,11.4106778381024,0,1.20990716048664,0,0,3.15679180770434,5.70285052684859,0,0,0,0,0,2.21879476821022,0,3.23374911467446,0,0.52418000472609,0,0,0,0,25.3141333034775,0,9.7171718535629,0,0,0,3.12882212375685,0.160317640503067,0.213452994739353,23.7773435402735,0.144090417154106,0,0,0,0,3.29971648463514,0,0,0,0,0,0,0,0,0,0,0,0,1.99679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0.670869375198532,0.472834243795189,0,0.844802692155252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0.704815022316672,0,0,0,0,0,0,2.55336503108073,0,0,0,0,0,0.886068179966986,0.122026264901963,0,1.14681839138014,0.443716206147409,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,9.3994076051817,0,0,0,0,1.11903606175556,1.86623178009892,0,0,0,0,0,18.4940180488464,0.619678821295011,0,0,0.47317047000752,0,0,0,0.192687675289379,1.41696576325585,0,0.205116364240755,0,0,0,0,0.490738592505128,0,1.65085738669511,0,0,6.90359926060101,0,0.0752103283492573,0,0,0,0.655087670040387,1.03499260351932,0.0675375846183947,0,0,0,0,25.2198572754304,3.96968942711435,0,12.2651930534011,0,0,0,0,0.620916591138472,0,0,0.203909198930495,0.263091094251396,0.118193840883968,0.111231401892069,0.235479278551542,0,3.08299379645168,0,3.0229862770607,7.6440270061928,0,0,0,1.21700790611806,0,4.35153944742377,0,1.38251932362818,18.0695490704517,0,0,0,0.4582137370881,0,0,0,0.098150233615243,16.2150840226418,0.647428837187895,0,0,6.79995390282795,0,0,0,0,0,2.71733118420012,1.15761237161917,0,0,0,0,0.588925401344836,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0,0,25.2301105872497,0.286679166302903,7.57303498527286,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,1.28823786971007,1.33982065078089,0,0,24.5219079186128,3.09483760902862,0.322944549180031,0.124149428591716,0,0.12729431655633,0,23.2956920249749,19.507298161861,25.5937801455433,2.65372159952903,2.66128285236811,6.83787456332186,0,0,0.0898252021065869,0,0.122241444182866,1.22068853494722,0.665756774185513,0.402547587182052,0 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| ||
|short_description=p2@BARX2 | |short_description=p2@BARX2 | ||
}} | }} |
Latest revision as of 17:25, 16 September 2015
Short description: | p2@BARX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BARX2_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -76bp_to_ENST00000281437_5end |
EntrezGene: | BARX2 |
HGNC: | 956 |
UniProt: | Q9UMQ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 2.54e-09 | 5 |
protein secreting cell | 9.05e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 8.60e-13 | 6 |
gland of oral region | 8.60e-13 | 6 |
gland of foregut | 8.60e-13 | 6 |
oral gland | 8.60e-13 | 6 |
oral cavity | 8.60e-13 | 6 |
oral opening | 9.72e-10 | 22 |
foregut | 1.53e-09 | 87 |
subdivision of digestive tract | 5.92e-09 | 118 |
digestive system | 1.13e-07 | 145 |
digestive tract | 1.13e-07 | 145 |
primitive gut | 1.13e-07 | 145 |
major salivary gland | 1.37e-07 | 2 |
gland of gut | 1.67e-07 | 10 |
throat | 3.66e-07 | 2 |
endoderm-derived structure | 4.66e-07 | 160 |
endoderm | 4.66e-07 | 160 |
presumptive endoderm | 4.66e-07 | 160 |
mouth | 5.85e-07 | 29 |
stomodeum | 5.85e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 6.26e-07 | 2 |
pancreatic carcinoma | 6.26e-07 | 2 |
pancreatic ductal adenocarcinoma | 6.26e-07 | 2 |