FFCP PHASE1:Hg19::chr2:27886258..27886282,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9913 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30632 | |||
|TSSclassifier=strong | |||
|UniProt=O94864 | |||
|association_with_transcript=161bp_to_uc002rlh.1_5end | |||
|cluster_id=chr2:27886258..27886282,- | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_3_at_SUPT7L_5end | |||
|id=chr2:27886258..27886282,- | |||
|ontology_enrichment_celltype=CL:0000763!6.66e-09!112;CL:0000049!6.66e-09!112 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,7.45e-08,108;CL:0000049,7.45e-08,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.36e-16!239;DOID:162!1.69e-16!235;DOID:0050687!1.20e-10!143;DOID:1240!2.37e-09!39;DOID:8692!2.84e-09!31;DOID:305!6.90e-09!106;DOID:0050686!8.05e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.89e-09;31!DOID:1240;1.44e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.81e-16,239;DOID:162,2.26e-16,235;DOID:0050687,1.18e-10,143;DOID:1240,1.81e-09,39;DOID:8692,2.21e-09,31;DOID:305,6.10e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0002780!8.41e-11!41;UBERON:0001890!8.41e-11!41;UBERON:0006240!8.41e-11!41;UBERON:0001049!1.46e-10!57;UBERON:0005068!1.46e-10!57;UBERON:0006241!1.46e-10!57;UBERON:0007135!1.46e-10!57;UBERON:0003080!3.21e-10!42;UBERON:0000955!5.97e-10!69;UBERON:0006238!5.97e-10!69;UBERON:0002616!2.55e-09!59;UBERON:0001893!2.99e-08!34;UBERON:0003075!5.59e-08!86;UBERON:0007284!5.59e-08!86;UBERON:0001869!5.94e-08!32;UBERON:0002020!7.74e-08!34;UBERON:0003528!7.74e-08!34;UBERON:0000073!8.85e-08!94;UBERON:0001016!8.85e-08!94;UBERON:0002791!9.28e-08!33;UBERON:0001017!9.87e-08!82;UBERON:0005743!2.55e-07!86;UBERON:0003056!6.38e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.27e-08;41!UBERON:0001890;6.27e-08;41!UBERON:0001869;1.96e-07;32!UBERON:0001893;2.17e-07;34!UBERON:0002791;2.90e-07;32!UBERON:0003528;3.74e-07;34!UBERON:0002020;3.74e-07;34!UBERON:0002619;8.59e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.51e-11,56;UBERON:0005068,5.51e-11,56;UBERON:0006241,5.51e-11,56;UBERON:0007135,5.51e-11,56;UBERON:0000073,7.72e-11,53;UBERON:0002616,7.72e-11,53;UBERON:0002780,8.00e-11,41;UBERON:0001890,8.00e-11,41;UBERON:0003080,8.00e-11,41;UBERON:0006240,8.00e-11,41;UBERON:0000955,3.19e-10,68;UBERON:0006238,3.19e-10,68;UBERON:0001016,1.87e-08,89;UBERON:0001893,2.89e-08,34;UBERON:0001017,5.19e-08,81;UBERON:0001869,5.75e-08,32;UBERON:0003528,7.50e-08,34;UBERON:0002020,7.50e-08,34;UBERON:0002791,1.23e-07,32;UBERON:0003056,7.95e-07,61 | |||
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| |||
|short_description=p3@SUPT7L | |||
}} |
Latest revision as of 18:01, 16 September 2015
Short description: | p3@SUPT7L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SUPT7L_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 161bp_to_uc002rlh.1_5end |
EntrezGene: | SUPT7L |
HGNC: | 30632 |
UniProt: | O94864 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 7.45e-08 | 108 |
common myeloid progenitor | 7.45e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
neural tube | 5.51e-11 | 56 |
neural rod | 5.51e-11 | 56 |
future spinal cord | 5.51e-11 | 56 |
neural keel | 5.51e-11 | 56 |
regional part of nervous system | 7.72e-11 | 53 |
regional part of brain | 7.72e-11 | 53 |
regional part of forebrain | 8.00e-11 | 41 |
forebrain | 8.00e-11 | 41 |
anterior neural tube | 8.00e-11 | 41 |
future forebrain | 8.00e-11 | 41 |
brain | 3.19e-10 | 68 |
future brain | 3.19e-10 | 68 |
nervous system | 1.87e-08 | 89 |
telencephalon | 2.89e-08 | 34 |
central nervous system | 5.19e-08 | 81 |
cerebral hemisphere | 5.75e-08 | 32 |
brain grey matter | 7.50e-08 | 34 |
gray matter | 7.50e-08 | 34 |
regional part of telencephalon | 1.23e-07 | 32 |
pre-chordal neural plate | 7.95e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.81e-16 | 239 |
cancer | 2.26e-16 | 235 |
cell type cancer | 1.18e-10 | 143 |
leukemia | 1.81e-09 | 39 |
myeloid leukemia | 2.21e-09 | 31 |
carcinoma | 6.10e-09 | 106 |