FFCP PHASE1:Hg19::chr11:131779810..131779827,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50863 | |EntrezGene=50863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17941 | |HGNC=17941 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-110bp_to_ENST00000498764_5end | |association_with_transcript=-110bp_to_ENST00000498764_5end | ||
|cluster_id=chr11:131779810..131779827,+ | |||
|description=CAGE_peak_9_at_NTM_5end | |description=CAGE_peak_9_at_NTM_5end | ||
|id=chr11:131779810..131779827,+ | |id=chr11:131779810..131779827,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.41e-17!180;CL:0000187!7.28e-10!54;CL:0000183!1.36e-09!59;CL:0000680!2.32e-09!57;CL:0000056!2.32e-09!57;CL:0000355!2.32e-09!57;CL:0000192!3.18e-09!42;CL:0000514!3.18e-09!42;CL:0000359!3.79e-09!32;CL:0000057!6.23e-08!75;CL:0000393!7.48e-08!60;CL:0000211!7.48e-08!60 | |ontology_enrichment_celltype=CL:0000055!1.41e-17!180;CL:0000187!7.28e-10!54;CL:0000183!1.36e-09!59;CL:0000680!2.32e-09!57;CL:0000056!2.32e-09!57;CL:0000355!2.32e-09!57;CL:0000192!3.18e-09!42;CL:0000514!3.18e-09!42;CL:0000359!3.79e-09!32;CL:0000057!6.23e-08!75;CL:0000393!7.48e-08!60;CL:0000211!7.48e-08!60 | ||
|ontology_enrichment_celltype_v019=CL:0000244;5.67e-09;4!CL:0000731;5.67e-09;4!CL:0000064;3.33e-07;3!CL:0000067;3.33e-07;3!CL:0005012;3.33e-07;3!CL:0002304;3.33e-07;3!CL:0002539;6.47e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,5.13e-09,4;CL:0000731,5.13e-09,4;CL:0000064,3.75e-07,3;CL:0000067,3.75e-07,3;CL:0005012,3.75e-07,3;CL:0002304,3.75e-07,3;CL:0002539,4.36e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.84e-08!14 | |ontology_enrichment_disease=DOID:2394!2.84e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;8.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.42e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!5.10e-18!365;UBERON:0000033!1.80e-15!123;UBERON:0000119!1.63e-14!312;UBERON:0000153!2.82e-14!129;UBERON:0007811!2.82e-14!129;UBERON:0000483!1.95e-13!309;UBERON:0000914!4.56e-13!83;UBERON:0002329!4.56e-13!83;UBERON:0003077!4.56e-13!83;UBERON:0003059!4.56e-13!83;UBERON:0007282!4.56e-13!83;UBERON:0009618!4.56e-13!83;UBERON:0007285!4.56e-13!83;UBERON:0000924!1.86e-12!173;UBERON:0006601!1.86e-12!173;UBERON:0002346!4.42e-12!90;UBERON:0004121!1.05e-11!169;UBERON:0000486!1.13e-11!82;UBERON:0003075!2.87e-11!86;UBERON:0007284!2.87e-11!86;UBERON:0002616!1.79e-10!59;UBERON:0001049!3.42e-10!57;UBERON:0005068!3.42e-10!57;UBERON:0006241!3.42e-10!57;UBERON:0007135!3.42e-10!57;UBERON:0000481!4.62e-10!347;UBERON:0000955!2.84e-09!69;UBERON:0006238!2.84e-09!69;UBERON:0004290!4.39e-09!70;UBERON:0003056!2.36e-08!61;UBERON:0001134!4.58e-08!61;UBERON:0002036!4.58e-08!61;UBERON:0003082!4.58e-08!61;UBERON:0001017!7.04e-08!82;UBERON:0000467!9.01e-08!625;UBERON:0000480!1.12e-07!626;UBERON:0004733!1.21e-07!12;UBERON:0002028!1.21e-07!12;UBERON:0007277!1.21e-07!12;UBERON:0001950!1.30e-07!20;UBERON:0002385!1.71e-07!63;UBERON:0001015!1.71e-07!63;UBERON:0000383!1.71e-07!63;UBERON:0000956!1.74e-07!25;UBERON:0000203!1.74e-07!25;UBERON:0005743!2.28e-07!86;UBERON:0000468!2.92e-07!659;UBERON:0000073!3.27e-07!94;UBERON:0001016!3.27e-07!94;UBERON:0000479!6.90e-07!787;UBERON:0004732!8.47e-07!13;UBERON:0001637!9.83e-07!42;UBERON:0003509!9.83e-07!42;UBERON:0004572!9.83e-07!42 | |ontology_enrichment_uberon=UBERON:0000475!5.10e-18!365;UBERON:0000033!1.80e-15!123;UBERON:0000119!1.63e-14!312;UBERON:0000153!2.82e-14!129;UBERON:0007811!2.82e-14!129;UBERON:0000483!1.95e-13!309;UBERON:0000914!4.56e-13!83;UBERON:0002329!4.56e-13!83;UBERON:0003077!4.56e-13!83;UBERON:0003059!4.56e-13!83;UBERON:0007282!4.56e-13!83;UBERON:0009618!4.56e-13!83;UBERON:0007285!4.56e-13!83;UBERON:0000924!1.86e-12!173;UBERON:0006601!1.86e-12!173;UBERON:0002346!4.42e-12!90;UBERON:0004121!1.05e-11!169;UBERON:0000486!1.13e-11!82;UBERON:0003075!2.87e-11!86;UBERON:0007284!2.87e-11!86;UBERON:0002616!1.79e-10!59;UBERON:0001049!3.42e-10!57;UBERON:0005068!3.42e-10!57;UBERON:0006241!3.42e-10!57;UBERON:0007135!3.42e-10!57;UBERON:0000481!4.62e-10!347;UBERON:0000955!2.84e-09!69;UBERON:0006238!2.84e-09!69;UBERON:0004290!4.39e-09!70;UBERON:0003056!2.36e-08!61;UBERON:0001134!4.58e-08!61;UBERON:0002036!4.58e-08!61;UBERON:0003082!4.58e-08!61;UBERON:0001017!7.04e-08!82;UBERON:0000467!9.01e-08!625;UBERON:0000480!1.12e-07!626;UBERON:0004733!1.21e-07!12;UBERON:0002028!1.21e-07!12;UBERON:0007277!1.21e-07!12;UBERON:0001950!1.30e-07!20;UBERON:0002385!1.71e-07!63;UBERON:0001015!1.71e-07!63;UBERON:0000383!1.71e-07!63;UBERON:0000956!1.74e-07!25;UBERON:0000203!1.74e-07!25;UBERON:0005743!2.28e-07!86;UBERON:0000468!2.92e-07!659;UBERON:0000073!3.27e-07!94;UBERON:0001016!3.27e-07!94;UBERON:0000479!6.90e-07!787;UBERON:0004732!8.47e-07!13;UBERON:0001637!9.83e-07!42;UBERON:0003509!9.83e-07!42;UBERON:0004572!9.83e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0000488;1.73e-08;4!UBERON:0001778;3.33e-07;3!UBERON:0001775;3.33e-07;3!UBERON:0000365;3.91e-07;5!UBERON:0004237;6.47e-07;10!UBERON:0004695;6.47e-07;10!UBERON:0002111;6.47e-07;10!UBERON:0004178;6.47e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,7.69e-09,309;UBERON:0000488,1.54e-08,4;UBERON:0000483,4.27e-08,306;UBERON:0010371,1.35e-07,104;UBERON:0010314,1.72e-07,132;UBERON:0000365,3.62e-07,5;UBERON:0001778,3.75e-07,3;UBERON:0001775,3.75e-07,3;UBERON:0004237,4.36e-07,10;UBERON:0004695,4.36e-07,10;UBERON:0002111,4.36e-07,10;UBERON:0004178,4.36e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0.436882744260345,6.06664049925443,0,0.331397375727916,0.672325146451775,3.61616716814386,0.730310090387373,1.95173119516203,0.738726348460727,1.22400414746552,0.313454721478088,0.286235987131057,0.410623275218653,0.376627918784408,0,0,0,0,0,0,1.83884244895785,3.31326510656075,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,1.5905718941022,1.45990461090791,3.21418378357831,5.32150553910154,5.44575671297381,0.261958150995425,2.91436230634034,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,2.48485975847659,0.12663051166458,0.132409180813219,0.573673241497627,0.709336764396714,0,0,0,0,0,0,0.756787138224657,0,0.468642863667593,0.624320153660641,0,0.448346041655403,0.23486899728753,0.161872944368132,0,1.22492502752936,2.08818339430006,0.103325781175765,0,0.494533858557114,0,0,1.0100166837244,0.500474079487857,3.04770527032601,0,0.919463387397059,0.300476117813194,0.226864366320042,2.15267562826634,0.427114777637135,0,0.900273288253207,0.721367704669072,0.772921620136887,0.558350568994769,1.35021065793013,1.16924406193438,0,0,0,0.710019185033229,0.201504196455281,0.339121184620975,1.35282597214308,2.45471508531751,0.286804595389004,0,0,0.232387885739037,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71567810298526,3.40225884766739,0,0.603173834469785,3.61094936118265,0,0,1.44331342025273,0.463721619900307,6.80970426567766,0,0,0,0,0,0,0,0,0.93733833986777,3.86358894857377,4.82035330624114,0.53735113621709,0.290633938513962,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0.616964956219941,0,0,1.79409734952577,1.30788020649984,0.66004457238855,1.80980402060889,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,4.27910715122155,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0,0.902838299183157,0,0,0.664225598535437,2.02806085395873,0.521301686808497,0,0,0,0,0,0,0,0.604780586659361,0.248107807818777,0.460385919864187,0,0.384417447767103,0,0.965123526861645,0,2.31314540703983,4.08391968220192,1.31403449622095,6.23105315020345,1.39452454151951,0,3.40860999515584,0,0.114814448164607,0,0,2.25599806453706,1.07821471946181,0,0,0.73886140225013,0,0,0.215915916102139,0,1.08378575017541,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0,0,0,7.46545199395024,1.95018073810956,1.6068392984416,2.22342652071881,0.308097234229289,0,0.551346289938122,0,0.145016693914229,0.170453254832202,0.356128142586949,1.81813406897076,3.0750410778417,19.652357724166,0.6069466851333,12.5508298310267,16.0554296883626,6.970372701606,0,0,2.60979897622522,2.59453906745488,0.143124886741991,0,0.949138274156178,0,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.235624804691373,0.606547444719948,1.58510321173008,0.842516912477962,0,0.487426979262569,0,0.136499911407986,0.424216295861138,0,0.551365343546124,0,0.438450885253763,0,0,1.82619339266434,1.54911749049875,0.845086807596724,1.43411352204052,0,1.07001315444375,2.12856638442359,0,0.329294892959902,0.379473173765715,0,2.50177493086331,0.670302275535787,0,0,4.73555909938353,3.36942951335251,3.54744122829341,10.5672764095201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,22.7069758246728,0,0,0,0,0,0.102268682502155,0,3.11039587661807,0,0,0,0,0,0,0,0.834912883456661,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0,4.5774520895125,1.87984741883082,4.13766666534966,0.87754158861589,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,1.1713222286267,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,4.52238351334278,3.7755776223568,1.07628353124994,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.271808412147228,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.403100834920358,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33649024647654,0,0,0.209818352539992,0,0,0,0,0,0,0,1.72844298240254,0.653174720218818,0,0,0.170388021785422,0,0,0,0.258565912723101,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34228891392159,0.876336514945499,1.14681839138014,0.332787154610557,0.620964029413834,0,0.249960815924213,0,0,0,0,0,1.34329322598187,0.701139929541673,0.554805861502613,0.378806010550178,0.251567901752575,0,0,1.36107831386915,1.86524640699337,2.51353754982378,0.955780602982214,0.899606224327209,2.63947026689641,2.48823724704513,9.83614343864581,5.73919567992907,0,1.14241563650639,2.84809513243263,0.363697318405119,0.751873899297419,3.24823631914946,2.78667122089031,4.80033317595784,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,2.47364804324233,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0.169732529954025,0,0.4957430570360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| ||
|short_description=p9@NTM | |short_description=p9@NTM | ||
}} | }} |
Latest revision as of 19:01, 16 September 2015
Short description: | p9@NTM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NTM_5end |
Coexpression cluster: | NA |
Association with transcript: | -110bp_to_ENST00000498764_5end |
EntrezGene: | NTM |
HGNC: | 17941 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 5.13e-09 | 4 |
urothelial cell | 5.13e-09 | 4 |
ciliated cell | 3.75e-07 | 3 |
ciliated epithelial cell | 3.75e-07 | 3 |
multi-ciliated epithelial cell | 3.75e-07 | 3 |
non-pigmented ciliary epithelial cell | 3.75e-07 | 3 |
aortic smooth muscle cell | 4.36e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cell layer | 7.69e-09 | 309 |
atypical epithelium | 1.54e-08 | 4 |
epithelium | 4.27e-08 | 306 |
ecto-epithelium | 1.35e-07 | 104 |
structure with developmental contribution from neural crest | 1.72e-07 | 132 |
urothelium | 3.62e-07 | 5 |
ciliary epithelium | 3.75e-07 | 3 |
ciliary body | 3.75e-07 | 3 |
blood vessel smooth muscle | 4.36e-07 | 10 |
arterial system smooth muscle | 4.36e-07 | 10 |
artery smooth muscle tissue | 4.36e-07 | 10 |
aorta smooth muscle tissue | 4.36e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.42e-08 | 14 |