FFCP PHASE1:Hg19::chr9:15552504..15552550,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=203238 | |EntrezGene=203238 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29828 | |HGNC=29828 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z3F8 | |UniProt=Q7Z3F8 | ||
|association_with_transcript=-321bp_to_uc003zmc.2,uc010mih.1_5end | |association_with_transcript=-321bp_to_uc003zmc.2,uc010mih.1_5end | ||
|cluster_id=chr9:15552504..15552550,+ | |||
|coexpression_cluster_id=C255 | |coexpression_cluster_id=C255 | ||
|description=CAGE_peak_13_at_C9orf93_5end | |description=CAGE_peak_13_at_C9orf93_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000307;1.03e-17;3!CL:0000138;1.32e-09;6!CL:0000153;7.91e-07;9!CL:0000447;7.91e-07;9!CL:0002202;8.61e-07;9!CL:0002632;8.61e-07;9 | |ontology_enrichment_celltype_v019=CL:0000307;1.03e-17;3!CL:0000138;1.32e-09;6!CL:0000153;7.91e-07;9!CL:0000447;7.91e-07;9!CL:0002202;8.61e-07;9!CL:0002632;8.61e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.12e-17,3;CL:0000069,1.12e-17,3;CL:0000307,1.12e-17,3;CL:0000377,1.12e-17,3;CL:0000058,1.32e-09,6;CL:0000138,1.32e-09,6;CL:0000153,7.91e-07,9;CL:0000447,7.91e-07,9;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;1.03e-17;3!UBERON:0003104;3.53e-07;31 | |ontology_enrichment_development_v019=CL:0000377;1.03e-17;3!UBERON:0003104;3.53e-07;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;2.42e-50;1!DOID:4549;2.42e-50;1!DOID:5861;2.42e-50;1!DOID:6496;2.42e-50;1!DOID:201;1.32e-09;6!DOID:0060100;1.32e-09;6 | |ontology_enrichment_disease_v019=DOID:3371;2.42e-50;1!DOID:4549;2.42e-50;1!DOID:5861;2.42e-50;1!DOID:6496;2.42e-50;1!DOID:201;1.32e-09;6!DOID:0060100;1.32e-09;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,2.42e-50,1;DOID:4549,2.42e-50,1;DOID:5861,2.42e-50,1;DOID:6496,2.42e-50,1;DOID:201,1.32e-09,6;DOID:0060100,1.32e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0002133!3.60e-07!2 | |ontology_enrichment_uberon=UBERON:0002133!3.60e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002418;8.00e-18;3!UBERON:0004755;8.00e-18;3!UBERON:0003126;2.26e-08;7!UBERON:0001005;2.26e-08;7 | |ontology_enrichment_uberon_v019=UBERON:0002418;8.00e-18;3!UBERON:0004755;8.00e-18;3!UBERON:0003126;2.26e-08;7!UBERON:0001005;2.26e-08;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,8.00e-18,3;UBERON:0004755,8.00e-18,3;UBERON:0003126,2.35e-08,7;UBERON:0001005,2.35e-08,7 | |||
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| ||
|short_description=p13@C9orf93 | |short_description=p13@C9orf93 | ||
}} | }} |
Latest revision as of 19:20, 16 September 2015
Short description: | p13@C9orf93 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_C9orf93_5end |
Coexpression cluster: | C255_Wilms_leiomyoblastoma_kidney_adrenal_MCF7_epithelioid_Mast |
Association with transcript: | -321bp_to_uc003zmc.2, uc010mih.1_5end |
EntrezGene: | C9orf93 |
HGNC: | 29828 |
UniProt: | Q7Z3F8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.12e-17 | 3 |
branched duct epithelial cell | 1.12e-17 | 3 |
tracheal epithelial cell | 1.12e-17 | 3 |
tracheoblast | 1.12e-17 | 3 |
chondroblast | 1.32e-09 | 6 |
chondrocyte | 1.32e-09 | 6 |
GAG secreting cell | 7.91e-07 | 9 |
carbohydrate secreting cell | 7.91e-07 | 9 |
epithelial cell of tracheobronchial tree | 8.85e-07 | 9 |
epithelial cell of lower respiratory tract | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 8.00e-18 | 3 |
skeletal tissue | 8.00e-18 | 3 |
trachea | 2.35e-08 | 7 |
respiratory airway | 2.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.42e-50 | 1 |
extraosseous chondrosarcoma | 2.42e-50 | 1 |
myxoid chondrosarcoma | 2.42e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 2.42e-50 | 1 |
connective tissue cancer | 1.32e-09 | 6 |
musculoskeletal system cancer | 1.32e-09 | 6 |