FFCP PHASE1:Hg19::chr19:19739007..19739051,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9170 | |EntrezGene=9170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3168 | |HGNC=3168 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HBW0 | |UniProt=Q9HBW0 | ||
|association_with_transcript=0bp_to_ENST00000407877,NM_004720,uc002nna.3,uc002nnb.3_5end | |association_with_transcript=0bp_to_ENST00000407877,NM_004720,uc002nna.3,uc002nnb.3_5end | ||
|cluster_id=chr19:19739007..19739051,- | |||
|description=CAGE_peak_1_at_LPAR2_5end | |description=CAGE_peak_1_at_LPAR2_5end | ||
|id=chr19:19739007..19739051,- | |id=chr19:19739007..19739051,- | ||
|ontology_enrichment_celltype=CL:0000066!2.75e-16!254;CL:0002076!5.48e-08!43 | |ontology_enrichment_celltype=CL:0000066!2.75e-16!254;CL:0002076!5.48e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.64e-07;18!CL:0000789;2.64e-07;18!CL:0002419;2.64e-07;18!CL:0002076;3.05e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.68e-22,253;CL:0002076,4.94e-09,42;CL:0000791,2.30e-07,18;CL:0000789,2.30e-07,18;CL:0002420,2.30e-07,18;CL:0002419,2.30e-07,18;CL:0000790,2.30e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;2.64e-07;18 | |||
|ontology_enrichment_disease=DOID:0050687!4.31e-09!143;DOID:305!4.35e-09!106 | |ontology_enrichment_disease=DOID:0050687!4.31e-09!143;DOID:305!4.35e-09!106 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.41e-07;22!DOID:2994;1.41e-07;22!DOID:1749;7.35e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,6.96e-13,143;DOID:305,5.20e-12,106;DOID:3095,1.59e-07,22;DOID:2994,1.59e-07,22;DOID:1749,6.95e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.66e-08!169;UBERON:0000925!4.66e-08!169;UBERON:0006595!4.66e-08!169;UBERON:0000464!5.99e-08!104;UBERON:0005153!2.62e-07!37 | |ontology_enrichment_uberon=UBERON:0004119!4.66e-08!169;UBERON:0000925!4.66e-08!169;UBERON:0006595!4.66e-08!169;UBERON:0000464!5.99e-08!104;UBERON:0005153!2.62e-07!37 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.78e-09,160;UBERON:0000925,4.78e-09,160;UBERON:0006595,4.78e-09,160;UBERON:0001008,3.12e-08,48;UBERON:0006554,3.55e-08,47;UBERON:0005153,2.43e-07,37;UBERON:0005178,8.43e-07,34;UBERON:0002224,8.43e-07,34 | |||
|phase1_expression=0,0,0,1.0007329835313,0.446961094427288,0,0,0,0.522371256399677,5.40614660303319,60.7087016136012,24.028550934319,22.683960127647,0.37129905888014,0.331397375727916,0,0,0,0,7.63350560076085,5.30401797235058,3.76145665773705,2.28988789704845,5.88560027813402,3.26410862946487,7.64134057479513,6.15754420874593,6.92654875560377,0.393364276848904,1.53531759238885,1.08371286321253,22.0661093874943,14.1566781825778,22.1852406100073,0,0.568676929949686,2.64240395401362,0.553995408531877,2.20598892217156,3.25516306073778,0.671746422719773,1.29557466407592,0,0,0,0.242584061187816,0,0.822335776043652,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0,0,0,1.21079900526674,0.368277635987565,0,0,0,0,0.22465726229299,0,0,0,0.19891667719909,0,0,3.82297027883492,0.889509253863555,2.98711155796555,2.00197993518006,2.87376219977242,5.2883589822789,6.67837628174755,5.69212969109448,5.28513470433845,4.58727873750275,3.96513985737078,3.92355994087075,1.05353633910031,12.5894252872853,16.1134412727158,19.9433454029524,19.3936334653187,10.4295125322749,13.2565385605725,11.6896037044747,15.5974639639243,9.13278313171995,8.19675409959398,12.7277815969557,21.1350677547364,24.581216688817,10.5240258946353,12.712100818149,7.53488022911136,8.6006206633995,10.1665514674091,11.4989076185474,8.27158201692233,7.2811893784365,5.49803912772208,7.33757106856558,9.5569624297229,12.370585623272,14.2567806667256,7.82990619204418,10.6228887258167,3.74792179657038,9.70786733380469,4.92676798152628,6.45141578319144,8.82552646085574,7.96534221355394,0,2.68280343881454,0.895037932904712,0,0,0.289693037921647,0,0.486634870302636,3.11964896641424,3.76939975686359,3.33772185633879,9.36500389808645,21.8577172975525,18.5392221392215,0.649094787309367,0.870648686496336,1.46253756570752,1.43094374583205,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,1.31780417436063,0,11.3384453557059,0,0,0,0,0,1.12135520028461,0,0,0,0.269421344139376,0,0.454072282934794,0.576175924479999,3.51482147750695,0.624320153660641,1.1409436430889,0.448346041655403,0.23486899728753,0.485618833104395,0.280901613404497,0.61246251376468,0.859840221182376,0.103325781175765,2.37600571456411,0,0,0,0.841680569770331,0.375355559615893,0,0.438977620880838,0,0,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0,0,0,0.169560592310488,15.8473899593903,11.4553370648151,14.6270343648392,25.9803994056038,22.5300606146525,21.2634915451219,18.0370235726745,20.6903097718015,22.2636189036256,1.56449532329816,0.643240938192885,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,1.6462960453256,1.47008711385542,0,1.96565443335525,0,0,11.8068901001389,1.3725424823882,22.7183090795855,15.7362454560667,19.9047365375029,9.25884451585296,1.3032332212413,0,1.44331342025273,4.40535538905292,0.352226082707465,0,0,0.190254152234598,39.5102198979638,45.4997665910282,0,2.57404691653161,0.445893486866185,12.185398418281,16.2942664352894,13.1850840435419,11.9112835194788,17.1474023723238,42.5554773873384,0,0.264145302039678,0.621984346622316,0.432359860250884,0.25248486685276,0.190493682876507,0.763976851116555,1.17217447210047,0,0.822619941626588,6.00686115687835,6.00235508524214,0.784917590417525,2.1798003441664,0.2933531432838,0.258543431515556,0,0,0,0,0.514414748524284,0,0.799266537048298,0.142977993658148,0,4.93944202068461,0,0,0,2.71295439353627,4.35766729300147,3.69900067373611,0,0,0,0,0,0,0,0,0,3.47463946379935,4.3346767244424,5.39068937148793,5.51875056002918,1.52456774533478,6.50699269288109,16.2390650683316,17.9242403907753,6.37938751653163,0.749007023947182,0,1.24324654030811,0.36807447515742,2.00068208423871,0,0,0.178428988797162,0.315404830067869,0,0,0,3.10419213877515,0,0.368738337083406,0.434418072340414,2.34961388955289,2.40200396667599,5.16920065307218,11.6485668442053,5.22965033236877,19.0970370011143,53.2593406433591,37.4963963728804,0.248107807818777,0.153461973288062,0.280660094433074,0,0,0,1.48418066444991,0.154209693802656,0,0,0,0,11.1190693624292,18.2460887975989,20.2578175658972,0.229628896329213,0.182091168006717,0.393373244878272,15.7919864517594,7.39347236202382,31.3739907670742,20.4594914514565,8.12747542475143,0,0.170093705276516,2.15915916102139,3.08454505380579,8.94123243894714,15.0506932156456,13.7633187444321,20.7769002232181,16.342857094719,0,0,2.3080511260475,3.60816110269676,5.85681110395745,1.95777922130672,0,0,14.9309039879005,12.3511446746939,0,0,0,0.15350367472613,0.137836572484531,0.322260734604821,0.435050081742686,0.170453254832202,0,6.94196644516108,9.4173133008902,6.76347376221296,12.3412492643771,0,0,0,0.308033580176089,0,0,0,0,1.116475108079,0.632758849437452,0.38126038784765,1.535386747868,0,0.318203247925937,0,0.17987245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|phase1_expression=0,0,0,1.0007329835313,0.446961094427288,0,0,0,0.522371256399677,5.40614660303319,60.7087016136012,24.028550934319,22.683960127647,0.37129905888014,0.331397375727916,0,0,0,0,7.63350560076085,5.30401797235058,3.76145665773705,2.28988789704845,5.88560027813402,3.26410862946487,7.64134057479513,6.15754420874593,6.92654875560377,0.393364276848904,1.53531759238885,1.08371286321253,22.0661093874943,14.1566781825778,22.1852406100073,0,0.568676929949686,2.64240395401362,0.553995408531877,2.20598892217156,3.25516306073778,0.671746422719773,1.29557466407592,0,0,0,0.242584061187816,0,0.822335776043652,0.309706370895104,0.28769239232215,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0.272906150057846,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0,0,0,1.21079900526674,0.368277635987565,0,0,0,0,0.22465726229299,0,0,0,0.19891667719909,0,0,3.82297027883492,0.889509253863555,2.98711155796555,2.00197993518006,2.87376219977242,5.2883589822789,6.67837628174755,5.69212969109448,5.28513470433845,4.58727873750275,3.96513985737078,3.92355994087075,1.05353633910031,12.5894252872853,16.1134412727158,19.9433454029524,19.3936334653187,10.4295125322749,13.2565385605725,11.6896037044747,15.5974639639243,9.13278313171995,8.19675409959398,12.7277815969557,21.1350677547364,24.581216688817,10.5240258946353,12.712100818149,7.53488022911136,8.6006206633995,10.1665514674091,11.4989076185474,8.27158201692233,7.2811893784365,5.49803912772208,7.33757106856558,9.5569624297229,12.370585623272,14.2567806667256,7.82990619204418,10.6228887258167,3.74792179657038,9.70786733380469,4.92676798152628,6.45141578319144,8.82552646085574,7.96534221355394,0,2.68280343881454,0.895037932904712,0,0,0.289693037921647,0,0.486634870302636,3.11964896641424,3.76939975686359,3.33772185633879,9.36500389808645,21.8577172975525,18.5392221392215,0.649094787309367,0.870648686496336,1.46253756570752,1.43094374583205,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,1.31780417436063,0,11.3384453557059,0,0,0,0,0,1.12135520028461,0,0,0,0.269421344139376,0,0.454072282934794,0.576175924479999,3.51482147750695,0.624320153660641,1.1409436430889,0.448346041655403,0.23486899728753,0.485618833104395,0.280901613404497,0.61246251376468,0.859840221182376,0.103325781175765,2.37600571456411,0,0,0,0.841680569770331,0.375355559615893,0,0.438977620880838,0,0,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0,0,0,0.169560592310488,15.8473899593903,11.4553370648151,14.6270343648392,25.9803994056038,22.5300606146525,21.2634915451219,18.0370235726745,20.6903097718015,22.2636189036256,1.56449532329816,0.643240938192885,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,1.6462960453256,1.47008711385542,0,1.96565443335525,0,0,11.8068901001389,1.3725424823882,22.7183090795855,15.7362454560667,19.9047365375029,9.25884451585296,1.3032332212413,0,1.44331342025273,4.40535538905292,0.352226082707465,0,0,0.190254152234598,39.5102198979638,45.4997665910282,0,2.57404691653161,0.445893486866185,12.185398418281,16.2942664352894,13.1850840435419,11.9112835194788,17.1474023723238,42.5554773873384,0,0.264145302039678,0.621984346622316,0.432359860250884,0.25248486685276,0.190493682876507,0.763976851116555,1.17217447210047,0,0.822619941626588,6.00686115687835,6.00235508524214,0.784917590417525,2.1798003441664,0.2933531432838,0.258543431515556,0,0,0,0,0.514414748524284,0,0.799266537048298,0.142977993658148,0,4.93944202068461,0,0,0,2.71295439353627,4.35766729300147,3.69900067373611,0,0,0,0,0,0,0,0,0,3.47463946379935,4.3346767244424,5.39068937148793,5.51875056002918,1.52456774533478,6.50699269288109,16.2390650683316,17.9242403907753,6.37938751653163,0.749007023947182,0,1.24324654030811,0.36807447515742,2.00068208423871,0,0,0.178428988797162,0.315404830067869,0,0,0,3.10419213877515,0,0.368738337083406,0.434418072340414,2.34961388955289,2.40200396667599,5.16920065307218,11.6485668442053,5.22965033236877,19.0970370011143,53.2593406433591,37.4963963728804,0.248107807818777,0.153461973288062,0.280660094433074,0,0,0,1.48418066444991,0.154209693802656,0,0,0,0,11.1190693624292,18.2460887975989,20.2578175658972,0.229628896329213,0.182091168006717,0.393373244878272,15.7919864517594,7.39347236202382,31.3739907670742,20.4594914514565,8.12747542475143,0,0.170093705276516,2.15915916102139,3.08454505380579,8.94123243894714,15.0506932156456,13.7633187444321,20.7769002232181,16.342857094719,0,0,2.3080511260475,3.60816110269676,5.85681110395745,1.95777922130672,0,0,14.9309039879005,12.3511446746939,0,0,0,0.15350367472613,0.137836572484531,0.322260734604821,0.435050081742686,0.170453254832202,0,6.94196644516108,9.4173133008902,6.76347376221296,12.3412492643771,0,0,0,0.308033580176089,0,0,0,0,1.116475108079,0.632758849437452,0.38126038784765,1.535386747868,0,0.318203247925937,0,0.17987245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| ||
|short_description=p1@LPAR2 | |short_description=p1@LPAR2 | ||
}} | }} |
Latest revision as of 20:27, 16 September 2015
Short description: | p1@LPAR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LPAR2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000407877, NM_004720, uc002nna.3, uc002nnb.3_5end |
EntrezGene: | LPAR2 |
HGNC: | 3168 |
UniProt: | Q9HBW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.68e-22 | 253 |
endo-epithelial cell | 4.94e-09 | 42 |
mature alpha-beta T cell | 2.30e-07 | 18 |
alpha-beta T cell | 2.30e-07 | 18 |
immature T cell | 2.30e-07 | 18 |
mature T cell | 2.30e-07 | 18 |
immature alpha-beta T cell | 2.30e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.78e-09 | 160 |
endoderm | 4.78e-09 | 160 |
presumptive endoderm | 4.78e-09 | 160 |
renal system | 3.12e-08 | 48 |
urinary system structure | 3.55e-08 | 47 |
epithelial bud | 2.43e-07 | 37 |
thoracic cavity element | 8.43e-07 | 34 |
thoracic cavity | 8.43e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 6.96e-13 | 143 |
carcinoma | 5.20e-12 | 106 |
germ cell and embryonal cancer | 1.59e-07 | 22 |
germ cell cancer | 1.59e-07 | 22 |
squamous cell carcinoma | 6.95e-07 | 14 |