FFCP PHASE1:Hg19::chr19:19740166..19740169,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:19740166..19740169,- to FFCP PHASE1:Hg19::chr19:19740166..19740169,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9170 | |EntrezGene=9170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3168 | |HGNC=3168 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-427bp_to_ENST00000542587,uc002nnc.3_5end | |||
|cluster_id=chr19:19740166..19740169,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_5_at_LPAR2_5end | |||
|id=chr19:19740166..19740169,- | |||
|ontology_enrichment_celltype=CL:0000037!1.23e-22!172;CL:0000566!1.23e-22!172;CL:0002032!1.51e-22!165;CL:0000837!1.51e-22!165;CL:0000738!7.48e-22!140;CL:0002087!1.08e-21!119;CL:0002031!9.43e-21!124;CL:0000988!4.34e-20!182;CL:0000766!2.92e-15!76;CL:0000763!1.55e-14!112;CL:0000049!1.55e-14!112;CL:0002194!6.51e-14!63;CL:0000576!6.51e-14!63;CL:0000040!6.51e-14!63;CL:0000559!6.51e-14!63;CL:0000839!9.45e-14!70;CL:0000557!2.49e-13!71;CL:0002009!5.09e-13!65;CL:0000860!5.86e-10!45;CL:0002057!7.28e-10!42;CL:0000838!2.89e-08!52;CL:0000542!6.43e-08!53;CL:0000051!6.43e-08!53;CL:0000084!8.33e-08!25;CL:0000827!8.33e-08!25;CL:0000791!2.76e-07!18;CL:0000789!2.76e-07!18;CL:0002420!2.76e-07!18;CL:0002419!2.76e-07!18;CL:0000790!2.76e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000895;5.74e-09;1!CL:0000791;5.88e-07;18!CL:0000789;5.88e-07;18!CL:0002419;5.88e-07;18!CL:0000625;8.99e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000810,7.27e-09,1;CL:0000895,7.27e-09,1;CL:0002436,7.27e-09,1;CL:0002427,7.27e-09,1;CL:0002428,7.27e-09,1;CL:0002429,7.27e-09,1;CL:0002433,7.27e-09,1;CL:0002431,7.27e-09,1;CL:0002432,7.27e-09,1;CL:0000791,6.80e-07,18;CL:0000789,6.80e-07,18;CL:0002420,6.80e-07,18;CL:0002419,6.80e-07,18;CL:0000790,6.80e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002427;5.74e-09;1!CL:0000790;5.88e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.10e-16!102;UBERON:0003061!3.10e-16!102;UBERON:0002193!5.12e-15!112;UBERON:0002371!2.60e-11!80;UBERON:0001474!3.70e-10!86;UBERON:0002405!6.48e-09!115;UBERON:0004765!2.33e-07!101;UBERON:0001434!2.33e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.52e-13;15!UBERON:0000179;3.52e-13;15!UBERON:0000463;3.52e-13;15!UBERON:0000029;5.74e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.15e-13,15;UBERON:0000179,3.15e-13,15;UBERON:0000463,3.15e-13,15;UBERON:0002193,2.04e-11,108;UBERON:0002390,6.25e-11,98;UBERON:0003061,6.25e-11,98;UBERON:0000029,3.88e-09,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.738905305049512,0.393553906568396,0.393364276848904,0.767658796194425,0.619264493264304,0,0.30120591877825,0,0.154934401160603,0,0,1.10799081706375,0.200544447470142,2.38711957787437,0.671746422719773,0.32389366601898,0.257575567634187,0.145398238779565,0.755751887377619,0,0.929716147622738,0.411167888021826,0,0.575384784644301,0.768482119587302,0.236482229888585,0,1.29096936716765,0,0.376484679085209,0.818718450173537,0.449446968890169,0.612167784741805,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0.580418477257168,1.13477044938228,0,0.75374599577023,0,0.217188844705117,0,0,0,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0.32145117339416,0.570025487482497,0.59675003159727,0.730656615058536,0,0,0,0,0,0,0,0.954053754535364,0,0,0.382273228125229,0,0,0.263384084775077,0.393419540227666,0.393010762749165,0.616804496998528,0.167186495390678,0.977766799900771,0.473447805734733,0,0.222820913770347,0.294605907474837,0.221533894583621,0,0.384273959177026,0.910415432919148,1.15106533222573,0.552700035571697,0.289803085735052,0.296573126324121,0.802622484269139,0,0.453237370790265,1.14966148080576,0,0,0,0.651083453856419,0,0.150575119077773,0.127986611154418,0,0.473554504088034,0,1.00803371612366,1.06976078313403,1.88271725047639,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.130979075497713,0.364295288292542,0,0,0.348259474598534,1.46253756570752,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0.286836620748814,0,0,0,0.74000264525148,0,0,0,0,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,1.20036438433761,0.103052529238439,0,0,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,1.39310378409594,0,0.118306800039844,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0.0895585227028483,0,0,0,0.176096868026452,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,1.2162378064119,0,2.10833939483032,0,0,0,0,0.205476322550383,0,0.560425719967636,0.197030760201927,0.431255149719035,0.898401253958239,0,0,0,1.00509759200609,0,2.99602809578873,0,0,0,0,0,0.207970861530807,0,0,0.234282829985426,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0,0.640365346820666,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.348631135379878,0.241718899183244,0.200506470303285,0.276242966807689,0.114814448164607,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0,2.02979043692868,0.764637207142375,4.5571774973933,1.66762242820452,0.822724546172388,0,0.540031437238115,9.51750211553125,0.106824071127473,0,0,0,0.577076851905779,0.142283686696828,0,0.199579371432817,0.191505370132367,0.846694330895531,0.324621940274555,0,1.82587743226554,0.313359791546046,0,0.338583555603207,0.1605880751037,0.403599414382095,0.851692475380653,0,0.307240764308458,0.447352215784832,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0,0.36408156524854,0.111443384277478,0.284136146806413,0,0,0,0,0,0.222617410045812,0.16480387422676,0.211125408127993,0.19924798825107,0.552567831062295,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,7.18449277040819,0,0,0,0,0.260427761085233,0,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0.179515288819544,0.108647371922008,0,0,0.533034776018635,0,0.31396051279005,0.166211681900156,0,0,0.167821586975843,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0,0,0.0967563312890851,0,0.246346371159628,0.0969890164884194,0,0.225980740780532,0.274083849293502,0,0.0633107959558787,0.195551382734803,0,0.213452994739353,0.39961921916426,0,0.114536596165916,0,0,0,0,0.407712618220842,0.418411385249333,0.101998217636322,0,0,0.273810757783986,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.0674035438541849,0.0984274815147488,0.338693328263138,0,0,0.321506296930038,0,0,0,0,0.0607495566580247,0.335434687599266,0,0.0524545881349981,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0.574647645245373,0.170388021785422,0.113312091520126,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0.414239055347196,1.48849806543585,0,0.12179259838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| ||
|short_description=p5@LPAR2 | |||
}} | }} |
Latest revision as of 20:31, 16 September 2015
Short description: | p5@LPAR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LPAR2_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -427bp_to_ENST00000542587, uc002nnc.3_5end |
EntrezGene: | LPAR2 |
HGNC: | 3168 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta thymocyte | 7.27e-09 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 7.27e-09 | 1 |
mature CD4 single-positive thymocyte | 7.27e-09 | 1 |
resting double-positive thymocyte | 7.27e-09 | 1 |
double-positive blast | 7.27e-09 | 1 |
CD69-positive double-positive thymocyte | 7.27e-09 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 7.27e-09 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 7.27e-09 | 1 |
CD24-positive, CD4 single-positive thymocyte | 7.27e-09 | 1 |
mature alpha-beta T cell | 6.80e-07 | 18 |
alpha-beta T cell | 6.80e-07 | 18 |
immature T cell | 6.80e-07 | 18 |
mature T cell | 6.80e-07 | 18 |
immature alpha-beta T cell | 6.80e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
blood | 3.15e-13 | 15 |
haemolymphatic fluid | 3.15e-13 | 15 |
organism substance | 3.15e-13 | 15 |
hemolymphoid system | 2.04e-11 | 108 |
hematopoietic system | 6.25e-11 | 98 |
blood island | 6.25e-11 | 98 |
lymph node | 3.88e-09 | 1 |