FFCP PHASE1:Hg19::chr2:128408105..128408146,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:128408105..128408146,-
|short_description=p9@LIMS2
|description=CAGE_peak_9_at_LIMS2_5end
|association_with_transcript=0bp_to_ENST00000409254,ENST000004135...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55679 | |EntrezGene=55679 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16084 | |HGNC=16084 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z4I2,F8WEF3 | |UniProt=Q7Z4I2,F8WEF3 | ||
|association_with_transcript=0bp_to_ENST00000409254,ENST00000413578_5end | |||
|cluster_id=chr2:128408105..128408146,- | |||
|description=CAGE_peak_9_at_LIMS2_5end | |||
|id=chr2:128408105..128408146,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0001014;6.03e-08;2!CL:0001016;6.03e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,6.07e-08,2;CL:0001016,6.07e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.80e-13;82!UBERON:0006241;1.04e-09;3!UBERON:0003057;1.04e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;4.85e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.59e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.56e-79!115;UBERON:0001049!1.36e-39!57;UBERON:0005068!1.36e-39!57;UBERON:0006241!1.36e-39!57;UBERON:0007135!1.36e-39!57;UBERON:0002616!4.68e-33!59;UBERON:0002780!1.26e-31!41;UBERON:0001890!1.26e-31!41;UBERON:0006240!1.26e-31!41;UBERON:0002346!2.78e-31!90;UBERON:0003080!1.34e-30!42;UBERON:0001017!3.10e-30!82;UBERON:0005743!1.12e-29!86;UBERON:0003075!1.90e-29!86;UBERON:0007284!1.90e-29!86;UBERON:0000955!1.93e-28!69;UBERON:0006238!1.93e-28!69;UBERON:0001893!3.44e-28!34;UBERON:0002020!7.09e-28!34;UBERON:0003528!7.09e-28!34;UBERON:0000073!9.50e-28!94;UBERON:0001016!9.50e-28!94;UBERON:0002791!6.51e-27!33;UBERON:0001869!8.47e-26!32;UBERON:0002619!2.91e-21!22;UBERON:0001950!4.42e-19!20;UBERON:0003056!4.47e-19!61;UBERON:0000956!5.22e-18!25;UBERON:0000203!5.22e-18!25;UBERON:0000924!4.71e-14!173;UBERON:0006601!4.71e-14!173;UBERON:0000033!6.66e-14!123;UBERON:0000025!1.62e-13!194;UBERON:0000153!2.33e-13!129;UBERON:0007811!2.33e-13!129;UBERON:0004121!8.25e-13!169;UBERON:0002420!6.26e-12!9;UBERON:0007245!6.26e-12!9;UBERON:0010009!6.26e-12!9;UBERON:0010011!6.26e-12!9;UBERON:0000454!6.26e-12!9;UBERON:0002308!9.45e-12!9;UBERON:0000125!9.45e-12!9;UBERON:0004111!1.94e-11!241;UBERON:0003076!5.64e-10!15;UBERON:0003057!5.64e-10!15;UBERON:0009663!1.12e-09!7;UBERON:0000477!2.75e-09!286;UBERON:0000200!4.90e-09!6;UBERON:0001871!1.13e-08!7;UBERON:0002298!1.95e-08!8;UBERON:0000475!1.43e-07!365;UBERON:0000349!2.14e-07!5;UBERON:0000481!3.65e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.06e-30;34!UBERON:0002619;1.34e-29;22!UBERON:0001950;8.72e-29;20!UBERON:0002780;1.55e-28;41!UBERON:0001890;1.55e-28;41!UBERON:0001869;5.25e-28;32!UBERON:0002791;5.42e-28;32!UBERON:0000956;1.05e-25;25!UBERON:0000203;1.05e-25;25!UBERON:0003528;7.36e-25;34!UBERON:0002020;7.36e-25;34!UBERON:0000073;7.04e-23;53!UBERON:0002616;7.04e-23;53!UBERON:0007023;2.01e-18;114!UBERON:0000200;2.01e-17;6!UBERON:0000955;2.10e-14;68!UBERON:0001017;3.12e-14;75!UBERON:0001016;5.89e-12;83!UBERON:0001871;1.15e-10;6!UBERON:0002021;8.83e-10;5!UBERON:0001870;1.04e-09;3!UBERON:0002240;1.04e-09;3!UBERON:0005174;1.04e-09;3!UBERON:0001137;1.04e-09;3!UBERON:0002420;3.86e-08;9!UBERON:0007245;3.86e-08;9!UBERON:0010009;3.86e-08;9!UBERON:0010011;3.86e-08;9!UBERON:0000454;3.86e-08;9!UBERON:0009663;4.22e-07;7!UBERON:0002784;5.14e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.82e-57,114;UBERON:0001049,7.72e-49,56;UBERON:0005068,7.72e-49,56;UBERON:0006241,7.72e-49,56;UBERON:0007135,7.72e-49,56;UBERON:0000073,5.17e-42,53;UBERON:0002616,5.17e-42,53;UBERON:0002780,4.25e-41,41;UBERON:0001890,4.25e-41,41;UBERON:0003080,4.25e-41,41;UBERON:0006240,4.25e-41,41;UBERON:0001893,7.11e-36,34;UBERON:0003075,2.58e-35,82;UBERON:0007284,2.58e-35,82;UBERON:0001017,2.91e-35,81;UBERON:0002346,2.93e-33,86;UBERON:0000955,6.93e-33,68;UBERON:0006238,6.93e-33,68;UBERON:0001016,7.23e-33,89;UBERON:0001869,2.10e-31,32;UBERON:0002791,2.21e-31,32;UBERON:0002619,1.76e-29,22;UBERON:0003528,2.80e-29,34;UBERON:0002020,2.80e-29,34;UBERON:0001950,1.28e-28,20;UBERON:0003056,5.69e-28,61;UBERON:0010371,5.79e-26,104;UBERON:0000956,1.33e-25,25;UBERON:0000203,1.33e-25,25;UBERON:0010314,2.22e-21,132;UBERON:0000200,2.30e-17,6;UBERON:0004121,2.72e-16,171;UBERON:0000924,2.72e-16,171;UBERON:0006601,2.72e-16,171;UBERON:0011216,1.98e-15,223;UBERON:0000025,1.08e-14,192;UBERON:0004111,1.65e-11,240;UBERON:0001871,1.32e-10,6;UBERON:0002240,4.93e-10,3;UBERON:0005174,4.93e-10,3;UBERON:0001137,4.93e-10,3;UBERON:0001870,6.69e-10,3;UBERON:0002021,1.45e-09,5;UBERON:0003076,3.07e-09,15;UBERON:0003057,3.07e-09,15;UBERON:0002420,2.74e-08,9;UBERON:0007245,2.74e-08,9;UBERON:0010009,2.74e-08,9;UBERON:0010011,2.74e-08,9;UBERON:0000454,2.74e-08,9;UBERON:0009663,3.10e-07,7;UBERON:0000483,5.91e-07,306;UBERON:0002784,6.27e-07,4;UBERON:0002702,7.01e-07,2;UBERON:0003135,7.12e-07,11;UBERON:0000119,8.47e-07,309 | |||
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|short_description=p9@LIMS2 | |||
}} | }} |
Latest revision as of 21:05, 16 September 2015
Short description: | p9@LIMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LIMS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000409254, ENST00000413578_5end |
EntrezGene: | LIMS2 |
HGNC: | 16084 |
UniProt: | Q7Z4I2F8WEF3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 6.07e-08 | 2 |
immature CD1a-positive Langerhans cell | 6.07e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.59e-07 | 2 |