FFCP PHASE1:Hg19::chr13:25254693..25254710,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=479 | |EntrezGene=479 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13816 | |HGNC=13816 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001upp.2,uc010aaa.2_5end | |association_with_transcript=0bp_to_uc001upp.2,uc010aaa.2_5end | ||
|cluster_id=chr13:25254693..25254710,+ | |||
|coexpression_cluster_id=C157 | |coexpression_cluster_id=C157 | ||
|description=CAGE_peak_2_at_ATP12A_5end | |description=CAGE_peak_2_at_ATP12A_5end | ||
|id=chr13:25254693..25254710,+ | |id=chr13:25254693..25254710,+ | ||
|ontology_enrichment_celltype=CL:0000622!1.00e-08!5;CL:0000039!1.88e-08!7;CL:0000586!1.88e-08!7;CL:0002076!3.72e-08!43;CL:0002251!1.19e-07!21;CL:0002322!3.56e-07!5;CL:0000154!3.69e-07!6 | |ontology_enrichment_celltype=CL:0000622!1.00e-08!5;CL:0000039!1.88e-08!7;CL:0000586!1.88e-08!7;CL:0002076!3.72e-08!43;CL:0002251!1.19e-07!21;CL:0002322!3.56e-07!5;CL:0000154!3.69e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.37e-10;7!CL:0000586;2.37e-10;7!CL:0002159;4.06e-10;14!CL:0000317;3.17e-09;2!CL:1000448;3.17e-09;2!CL:0002308;3.17e-09;2!CL:0002140;3.17e-09;2!CL:0000575;4.34e-09;2!CL:0000622;2.86e-08;5!CL:0002537;3.54e-08;5!CL:0000362;1.28e-07;9!CL:0000154;5.89e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.80e-10,7;CL:0000586,2.80e-10,7;CL:0002159,3.83e-10,14;CL:0000317,2.31e-09,2;CL:1000448,2.31e-09,2;CL:0002308,2.31e-09,2;CL:0002140,2.31e-09,2;CL:0000575,4.53e-09,2;CL:0000622,2.37e-08,5;CL:0002537,3.63e-08,5;CL:0000362,1.18e-07,9;CL:0000154,5.04e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.55e-09!115;UBERON:0001950!1.20e-07!20;UBERON:0001004!2.40e-07!72;UBERON:0004119!6.89e-07!169;UBERON:0000925!6.89e-07!169;UBERON:0006595!6.89e-07!169;UBERON:0004121!6.95e-07!169;UBERON:0002619!9.61e-07!22 | |ontology_enrichment_uberon=UBERON:0007023!6.55e-09!115;UBERON:0001950!1.20e-07!20;UBERON:0001004!2.40e-07!72;UBERON:0004119!6.89e-07!169;UBERON:0000925!6.89e-07!169;UBERON:0006595!6.89e-07!169;UBERON:0004121!6.95e-07!169;UBERON:0002619!9.61e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;2.50e-10;2!UBERON:0000341;5.81e-10;2!UBERON:0002419;3.17e-09;2!UBERON:0007771;3.17e-09;2!UBERON:0003297;3.17e-09;2!UBERON:0001821;3.17e-09;2!UBERON:0003487;3.17e-09;2!UBERON:0001820;3.17e-09;2!UBERON:0000922;4.11e-08;49!UBERON:0001003;7.08e-07;15!UBERON:0007376;7.08e-07;15!UBERON:0005631;8.23e-07;10!UBERON:0000158;8.23e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.50e-10,2;UBERON:0000341,5.81e-10,2;UBERON:0002419,2.31e-09,2;UBERON:0007771,2.31e-09,2;UBERON:0003297,2.31e-09,2;UBERON:0001821,2.31e-09,2;UBERON:0003487,2.31e-09,2;UBERON:0001820,2.31e-09,2;UBERON:0005089,2.31e-09,2;UBERON:0005088,2.31e-09,2;UBERON:0000065,2.68e-07,54;UBERON:0001003,6.64e-07,15;UBERON:0007376,6.64e-07,15;UBERON:0007383,6.64e-07,15;UBERON:0005178,9.10e-07,34;UBERON:0002224,9.10e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10844143144775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501559486172034,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,1.45718115317017,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48875241714027,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.573609190778008,0.365921118388786,0.132529768321485,0.580969714347592,0.414644220061482,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.2802611309364,2.24803506515239,0.703702806881416,0.925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0.766765358330422,0,0,0,0.144119953416961,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10497186723076,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,1.72279661398852,3.90036147621913,0,0,0,0,0,0,0,0,0.0890320356467374,0,4.42037154939744,0.765676274967505,2.6301023022443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,1.34060455107157,0,0.188287601553558,0,0,2.66058092122005,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29740072527842,1.18785872333055,4.30024982938925,0,0,0,0,0.63337622438398,31.481182143669,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,2.37020365273626,0.230850775511391,0,2.07507513949254,0,0.108647371922008,1.5950057986596,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,31.7735675365485,0,0,0,0,0,0,0,0,0,0,6.04953580243319,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.872901148395775,0,1.12990370390266,0,0,0.189932387867636,3.12882212375685,0,0,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0.525774708558629,0,0,0,0.798716001995964,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.964518890790115,0,0,0.2249738915515,0,0.121499113316049,2.68347750079413,2.60058834087354,5.92736845925479,0,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0,0,0,2.77647272676006,0.628817220398664,3.72815149812476,0,1.58089305518355,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.3755727921195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.327130788511688,0,0,0,0,0,0,0,0,1.11903606175556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,1.41696576325585,0,1.23069818544453,0,0.899044282034833,0,0,0,0.353909170043221,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0.496211178389294,0,0.127762427639595,0,0.336283722218824,0.606965604236632,0.227662191351298,0.532214220975833,0.115233987555779,0,0,0.394636641377094,0.118193840883968,0,0.156986185701028,0,0,42.9184598639463,0,0,0,0,0,0,0,0.62164849248911,0.51215543128185,38.019281399775,0,0,0,0,0,0,0,0,0,0,0,0,0,14.085618798715,0,0.596852325484105,0.118920090777569,0,0,1.50962843566674,0,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0.135982980381829,0,2.645134202577,0,0,0,0,0.327796715891087,0,0.61193297845189,4.00826107898341,25.9143616688263,94.0153272346407,0.227336094654718,0,0,0,12.7940389140589,8.33225510123091,0.387533459016037,0.682821857254437,0,0.12729431655633,0,0.653150243690884,1.02669990325584,13.3357064968883,41.0251014846109,58.5482227520984,0,0,0,0,14.0784565442073,0,0,0,0.201273793591026,0 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| ||
|short_description=p2@ATP12A | |short_description=p2@ATP12A | ||
}} | }} |
Latest revision as of 21:34, 16 September 2015
Short description: | p2@ATP12A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ATP12A_5end |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | 0bp_to_uc001upp.2, uc010aaa.2_5end |
EntrezGene: | ATP12A |
HGNC: | 13816 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.80e-10 | 7 |
germ cell | 2.80e-10 | 7 |
general ecto-epithelial cell | 3.83e-10 | 14 |
sebum secreting cell | 2.31e-09 | 2 |
epithelial cell of sweat gland | 2.31e-09 | 2 |
epithelial cell of skin gland | 2.31e-09 | 2 |
acinar cell of sebaceous gland | 2.31e-09 | 2 |
corneal epithelial cell | 4.53e-09 | 2 |
acinar cell | 2.37e-08 | 5 |
amnion mesenchymal stem cell | 3.63e-08 | 5 |
epidermal cell | 1.18e-07 | 9 |
protein secreting cell | 5.04e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.50e-10 | 2 |
throat | 5.81e-10 | 2 |
skin gland | 2.31e-09 | 2 |
epidermis gland | 2.31e-09 | 2 |
gland of integumental system | 2.31e-09 | 2 |
sebaceous gland | 2.31e-09 | 2 |
skin sebaceous gland | 2.31e-09 | 2 |
sweat gland | 2.31e-09 | 2 |
sweat gland placode | 2.31e-09 | 2 |
sebaceous gland placode | 2.31e-09 | 2 |
respiratory tract | 2.68e-07 | 54 |
skin epidermis | 6.64e-07 | 15 |
outer epithelium | 6.64e-07 | 15 |
enveloping layer of ectoderm | 6.64e-07 | 15 |
thoracic cavity element | 9.10e-07 | 34 |
thoracic cavity | 9.10e-07 | 34 |