FFCP PHASE1:Hg19::chr19:2096259..2096342,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=126308 | |EntrezGene=126308 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=29802 | |HGNC=29802 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q96BX8 | |UniProt=Q96BX8 | ||
|association_with_transcript=0bp_to_ENST00000357066,NM_130807,uc002luv.2_5end | |association_with_transcript=0bp_to_ENST00000357066,NM_130807,uc002luv.2_5end | ||
|cluster_id=chr19:2096259..2096342,- | |||
|coexpression_cluster_id=C2443 | |coexpression_cluster_id=C2443 | ||
|description=CAGE_peak_1_at_MOB3A_5end | |description=CAGE_peak_1_at_MOB3A_5end |
Latest revision as of 21:57, 16 September 2015
Short description: | p1@MOB3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MOB3A_5end |
Coexpression cluster: | C2443_Mesenchymal_Hepatic_Alveolar_Smooth_Astrocyte_Renal_Hair |
Association with transcript: | 0bp_to_ENST00000357066, NM_130807, uc002luv.2_5end |
EntrezGene: | MOB3A |
HGNC: | 29802 |
UniProt: | Q96BX8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@MOB3A |
---|
0
50
100
150
200
250
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 4.11e-12 | 433 |
multi fate stem cell | 1.32e-11 | 427 |
endothelial cell | 1.42e-11 | 36 |
myeloid leukocyte | 1.02e-10 | 72 |
meso-epithelial cell | 2.54e-10 | 45 |
stem cell | 4.80e-10 | 441 |
mesodermal cell | 3.39e-09 | 121 |
granulocyte monocyte progenitor cell | 5.74e-09 | 67 |
connective tissue cell | 8.07e-09 | 361 |
defensive cell | 1.21e-08 | 48 |
Showing 1 to 10 of 25 entries
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.37e-22 | 203 |
mesoderm | 2.00e-21 | 315 |
mesoderm-derived structure | 2.00e-21 | 315 |
presumptive mesoderm | 2.00e-21 | 315 |
hemolymphoid system | 2.94e-14 | 108 |
musculoskeletal system | 5.43e-14 | 167 |
hematopoietic system | 1.08e-12 | 98 |
blood island | 1.08e-12 | 98 |
immune system | 3.18e-12 | 93 |
cardiovascular system | 2.78e-11 | 109 |
Showing 1 to 10 of 36 entries