FFCP PHASE1:Hg19::chr6:168720382..168720422,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=168002 | |EntrezGene=168002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21231 | |HGNC=21231 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SW24 | |UniProt=Q5SW24 | ||
|association_with_transcript=0bp_to_ENST00000366795,NM_214462,uc003qwq.2_5end | |association_with_transcript=0bp_to_ENST00000366795,NM_214462,uc003qwq.2_5end | ||
|cluster_id=chr6:168720382..168720422,- | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_1_at_DACT2_5end | |description=CAGE_peak_1_at_DACT2_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002541;5.54e-13;3!CL:0000349;2.57e-09;19!CL:0002536;2.49e-08;2 | |ontology_enrichment_celltype_v019=CL:0002541;5.54e-13;3!CL:0000349;2.57e-09;19!CL:0002536;2.49e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,5.35e-13,3;CL:0000349,1.93e-09,19;CL:0002536,1.16e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;5.73e-09;2 | |ontology_enrichment_development_v019=UBERON:0010122;5.73e-09;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000369;6.59e-16;4!UBERON:0002435;6.59e-16;4!UBERON:0000204;6.59e-16;4!UBERON:0009663;1.21e-13;7!UBERON:0003124;5.54e-13;3!UBERON:0000920;5.54e-13;3!UBERON:0005383;1.32e-12;3!UBERON:0005382;1.32e-12;3!UBERON:0000478;6.70e-12;24!UBERON:0002420;1.51e-10;9!UBERON:0000125;1.51e-10;9!UBERON:0007245;1.51e-10;9!UBERON:0002308;1.51e-10;9!UBERON:0010009;1.51e-10;9!UBERON:0010011;1.51e-10;9!UBERON:0000454;1.51e-10;9!UBERON:0001987;5.55e-10;4!UBERON:0005631;1.23e-09;10!UBERON:0000158;1.23e-09;10!UBERON:0001873;5.73e-09;2 | |ontology_enrichment_uberon_v019=UBERON:0000369;6.59e-16;4!UBERON:0002435;6.59e-16;4!UBERON:0000204;6.59e-16;4!UBERON:0009663;1.21e-13;7!UBERON:0003124;5.54e-13;3!UBERON:0000920;5.54e-13;3!UBERON:0005383;1.32e-12;3!UBERON:0005382;1.32e-12;3!UBERON:0000478;6.70e-12;24!UBERON:0002420;1.51e-10;9!UBERON:0000125;1.51e-10;9!UBERON:0007245;1.51e-10;9!UBERON:0002308;1.51e-10;9!UBERON:0010009;1.51e-10;9!UBERON:0010011;1.51e-10;9!UBERON:0000454;1.51e-10;9!UBERON:0001987;5.55e-10;4!UBERON:0005631;1.23e-09;10!UBERON:0000158;1.23e-09;10!UBERON:0001873;5.73e-09;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,7.65e-21,7;UBERON:0005631,2.55e-17,14;UBERON:0000158,2.55e-17,14;UBERON:0000369,4.33e-16,4;UBERON:0002435,4.33e-16,4;UBERON:0000204,4.33e-16,4;UBERON:0010082,4.33e-16,4;UBERON:0009663,1.03e-13,7;UBERON:0000920,5.35e-13,3;UBERON:0005383,1.28e-12,3;UBERON:0005382,1.28e-12,3;UBERON:0000478,5.13e-12,24;UBERON:0002420,1.34e-10,9;UBERON:0000125,1.34e-10,9;UBERON:0007245,1.34e-10,9;UBERON:0002308,1.34e-10,9;UBERON:0010009,1.34e-10,9;UBERON:0010011,1.34e-10,9;UBERON:0000454,1.34e-10,9;UBERON:0001987,5.41e-10,4;UBERON:0004340,5.41e-10,4;UBERON:0001873,5.31e-09,2;UBERON:0010122,5.31e-09,2 | |||
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| ||
|short_description=p1@DACT2 | |short_description=p1@DACT2 | ||
}} | }} |
Latest revision as of 22:21, 16 September 2015
Short description: | p1@DACT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DACT2_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000366795, NM_214462, uc003qwq.2_5end |
EntrezGene: | DACT2 |
HGNC: | 21231 |
UniProt: | Q5SW24 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 5.35e-13 | 3 |
extraembryonic cell | 1.93e-09 | 19 |
amniotic epithelial cell | 1.16e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
chorion | 7.65e-21 | 7 |
extraembryonic membrane | 2.55e-17 | 14 |
membranous layer | 2.55e-17 | 14 |
corpus striatum | 4.33e-16 | 4 |
striatum | 4.33e-16 | 4 |
ventral part of telencephalon | 4.33e-16 | 4 |
future corpus striatum | 4.33e-16 | 4 |
telencephalic nucleus | 1.03e-13 | 7 |
egg chorion | 5.35e-13 | 3 |
caudate-putamen | 1.28e-12 | 3 |
dorsal striatum | 1.28e-12 | 3 |
extraembryonic structure | 5.13e-12 | 24 |
basal ganglion | 1.34e-10 | 9 |
neural nucleus | 1.34e-10 | 9 |
nuclear complex of neuraxis | 1.34e-10 | 9 |
nucleus of brain | 1.34e-10 | 9 |
aggregate regional part of brain | 1.34e-10 | 9 |
collection of basal ganglia | 1.34e-10 | 9 |
cerebral subcortex | 1.34e-10 | 9 |
placenta | 5.41e-10 | 4 |
allantois | 5.41e-10 | 4 |
caudate nucleus | 5.31e-09 | 2 |
future caudate nucleus | 5.31e-09 | 2 |