FFCP PHASE1:Hg19::chr11:16629205..16629216,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55553 | |EntrezGene=55553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16421 | |HGNC=16421 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=57bp_to_ENST00000525835_5end | |association_with_transcript=57bp_to_ENST00000525835_5end | ||
|cluster_id=chr11:16629205..16629216,- | |||
|description=CAGE_peak_16_at_SOX6_5end | |description=CAGE_peak_16_at_SOX6_5end | ||
|id=chr11:16629205..16629216,- | |id=chr11:16629205..16629216,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.56e-18;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;2.31e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.40e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.40e-26!82;UBERON:0002780!8.93e-26!41;UBERON:0001890!8.93e-26!41;UBERON:0006240!8.93e-26!41;UBERON:0005743!1.39e-25!86;UBERON:0003080!6.36e-25!42;UBERON:0000073!2.62e-24!94;UBERON:0001016!2.62e-24!94;UBERON:0001049!9.17e-23!57;UBERON:0005068!9.17e-23!57;UBERON:0006241!9.17e-23!57;UBERON:0007135!9.17e-23!57;UBERON:0000924!3.15e-22!173;UBERON:0006601!3.15e-22!173;UBERON:0001893!4.00e-22!34;UBERON:0002346!4.38e-22!90;UBERON:0007023!4.05e-21!115;UBERON:0000955!4.34e-21!69;UBERON:0006238!4.34e-21!69;UBERON:0002791!5.63e-21!33;UBERON:0001869!5.14e-20!32;UBERON:0002020!5.29e-20!34;UBERON:0003528!5.29e-20!34;UBERON:0002616!6.12e-20!59;UBERON:0004121!3.33e-19!169;UBERON:0003075!1.92e-18!86;UBERON:0007284!1.92e-18!86;UBERON:0000956!1.60e-16!25;UBERON:0000203!1.60e-16!25;UBERON:0003056!3.14e-16!61;UBERON:0000033!1.64e-13!123;UBERON:0001950!2.24e-13!20;UBERON:0002619!2.75e-13!22;UBERON:0000153!3.99e-13!129;UBERON:0007811!3.99e-13!129;UBERON:0001872!2.37e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.44e-20;4!UBERON:0000923;4.44e-20;4!UBERON:0010316;4.44e-20;4!UBERON:0005291;4.44e-20;4!UBERON:0002050;3.45e-16;5!UBERON:0005423;3.45e-16;5!UBERON:0000922;2.42e-15;49!UBERON:0007029;7.54e-10;1!UBERON:0001389;7.54e-10;1!UBERON:0000026;7.54e-10;1!UBERON:0008784;7.54e-10;1!UBERON:0006058;7.54e-10;1!UBERON:0003663;7.54e-10;1!UBERON:0004256;7.54e-10;1!UBERON:0004708;7.54e-10;1!UBERON:0002101;7.54e-10;1!UBERON:0004709;7.54e-10;1!UBERON:0002529;7.54e-10;1!UBERON:0010538;7.54e-10;1!UBERON:0003661;7.54e-10;1!UBERON:0010890;7.54e-10;1!UBERON:0002471;7.54e-10;1!UBERON:0001383;7.54e-10;1!UBERON:0010758;7.54e-10;1!UBERON:0010707;7.54e-10;1!UBERON:0000978;7.54e-10;1!UBERON:0002103;7.54e-10;1!UBERON:0001665;7.54e-10;1!UBERON:0003823;7.54e-10;1!UBERON:0000154;7.54e-10;1!UBERON:0010709;7.54e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,5.30e-10,1;UBERON:0001389,5.30e-10,1;UBERON:0000026,5.30e-10,1;UBERON:0008784,5.30e-10,1;UBERON:0006058,5.30e-10,1;UBERON:0003663,5.30e-10,1;UBERON:0004256,5.30e-10,1;UBERON:0004708,5.30e-10,1;UBERON:0002101,5.30e-10,1;UBERON:0004709,5.30e-10,1;UBERON:0002529,5.30e-10,1;UBERON:0010538,5.30e-10,1;UBERON:0003661,5.30e-10,1;UBERON:0010890,5.30e-10,1;UBERON:0002471,5.30e-10,1;UBERON:0001383,5.30e-10,1;UBERON:0004357,5.30e-10,1;UBERON:0004347,5.30e-10,1;UBERON:0005420,5.30e-10,1;UBERON:0005732,5.30e-10,1;UBERON:0010758,5.30e-10,1;UBERON:0010707,5.30e-10,1;UBERON:0000978,5.30e-10,1;UBERON:0002103,5.30e-10,1;UBERON:0001665,5.30e-10,1;UBERON:0003823,5.30e-10,1;UBERON:0000154,5.30e-10,1;UBERON:0010709,5.30e-10,1;UBERON:0005733,5.30e-10,1;UBERON:0005730,5.30e-10,1;UBERON:0007029,8.24e-10,1;UBERON:0004121,2.49e-07,171;UBERON:0000924,2.49e-07,171;UBERON:0006601,2.49e-07,171 | |||
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| ||
|short_description=p16@SOX6 | |short_description=p16@SOX6 | ||
}} | }} |
Latest revision as of 23:13, 16 September 2015
Short description: | p16@SOX6 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SOX6_5end |
Coexpression cluster: | NA |
Association with transcript: | 57bp_to_ENST00000525835_5end |
EntrezGene: | SOX6 |
HGNC: | 16421 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 5.30e-10 | 1 |
soleus muscle | 5.30e-10 | 1 |
appendage | 5.30e-10 | 1 |
lower limb segment | 5.30e-10 | 1 |
multi-limb segment region | 5.30e-10 | 1 |
hindlimb muscle | 5.30e-10 | 1 |
hindlimb zeugopod muscle | 5.30e-10 | 1 |
paired limb/fin | 5.30e-10 | 1 |
limb | 5.30e-10 | 1 |
pelvic appendage | 5.30e-10 | 1 |
limb segment | 5.30e-10 | 1 |
paired limb/fin segment | 5.30e-10 | 1 |
limb muscle | 5.30e-10 | 1 |
pelvic complex muscle | 5.30e-10 | 1 |
zeugopod | 5.30e-10 | 1 |
muscle of leg | 5.30e-10 | 1 |
paired limb/fin bud | 5.30e-10 | 1 |
limb bud | 5.30e-10 | 1 |
pelvic appendage bud | 5.30e-10 | 1 |
limb/fin field | 5.30e-10 | 1 |
subdivision of organism along appendicular axis | 5.30e-10 | 1 |
appendage girdle complex | 5.30e-10 | 1 |
leg | 5.30e-10 | 1 |
hindlimb | 5.30e-10 | 1 |
triceps surae | 5.30e-10 | 1 |
hindlimb zeugopod | 5.30e-10 | 1 |
posterior region of body | 5.30e-10 | 1 |
pelvic complex | 5.30e-10 | 1 |
limb field | 5.30e-10 | 1 |
hindlimb/pelvic fin field | 5.30e-10 | 1 |
surface | 8.24e-10 | 1 |
ectoderm-derived structure | 2.49e-07 | 171 |
ectoderm | 2.49e-07 | 171 |
presumptive ectoderm | 2.49e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.40e-08 | 10 |