FFCP PHASE1:Hg19::chr2:33661536..33661549,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25780 | |EntrezGene=25780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14545 | |HGNC=14545 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=56bp_to_ENST00000497723_5end | |association_with_transcript=56bp_to_ENST00000497723_5end | ||
|cluster_id=chr2:33661536..33661549,+ | |||
|coexpression_cluster_id=C357 | |coexpression_cluster_id=C357 | ||
|description=CAGE_peak_17_at_RASGRP3_5end | |description=CAGE_peak_17_at_RASGRP3_5end | ||
|id=chr2:33661536..33661549,+ | |id=chr2:33661536..33661549,+ | ||
|ontology_enrichment_celltype=CL:0002139!1.79e-17!24;CL:0005020!1.70e-16!6;CL:0002138!1.70e-16!6;CL:0005022!1.70e-16!6;CL:0002144!8.81e-13!3;CL:0000115!3.28e-11!35;CL:0002078!1.95e-08!44;CL:0000071!3.68e-07!18;CL:0002546!3.68e-07!18 | |ontology_enrichment_celltype=CL:0002139!1.79e-17!24;CL:0005020!1.70e-16!6;CL:0002138!1.70e-16!6;CL:0005022!1.70e-16!6;CL:0002144!8.81e-13!3;CL:0000115!3.28e-11!35;CL:0002078!1.95e-08!44;CL:0000071!3.68e-07!18;CL:0002546!3.68e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0002138;4.24e-75;6!CL:0002139;2.00e-42;24!CL:0002144;1.35e-38;3!CL:0000115;1.32e-23;36!CL:0002078;5.08e-18;45!CL:0000213;8.88e-11;58!CL:0000215;8.88e-11;58!CL:0000071;2.73e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,3.19e-75,6;CL:0002138,3.19e-75,6;CL:0005022,3.19e-75,6;CL:0002139,1.73e-42,24;CL:0002144,1.23e-38,3;CL:0000115,1.73e-28,36;CL:0002078,7.09e-23,45;CL:0000213,7.88e-18,58;CL:0000215,7.88e-18,58;CL:0000222,1.15e-08,121;CL:0000071,2.68e-07,18;CL:0002546,2.68e-07,18 | |||
|ontology_enrichment_development_v019=CL:0005022;4.24e-75;6!CL:0002546;2.73e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001915!8.81e-13!3;UBERON:0001982!8.81e-13!3;UBERON:0001473!2.80e-12!8;UBERON:0004536!2.80e-12!8;UBERON:0006558!2.80e-12!8;UBERON:0007023!2.56e-10!115;UBERON:0002465!9.60e-10!10;UBERON:0001986!3.68e-07!18;UBERON:0004638!3.68e-07!18;UBERON:0004852!3.68e-07!18 | |ontology_enrichment_uberon=UBERON:0001915!8.81e-13!3;UBERON:0001982!8.81e-13!3;UBERON:0001473!2.80e-12!8;UBERON:0004536!2.80e-12!8;UBERON:0006558!2.80e-12!8;UBERON:0007023!2.56e-10!115;UBERON:0002465!9.60e-10!10;UBERON:0001986!3.68e-07!18;UBERON:0004638!3.68e-07!18;UBERON:0004852!3.68e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.51e-56;8!UBERON:0004536;1.51e-56;8!UBERON:0006558;1.51e-56;8!UBERON:0002465;2.10e-45;10!UBERON:0010523;1.35e-38;3!UBERON:0001915;1.35e-38;3!UBERON:0001982;1.35e-38;3!UBERON:0002405;3.00e-17;27!UBERON:0000055;3.86e-13;65!UBERON:0002193;2.07e-10;42!UBERON:0002049;5.80e-08;75!UBERON:0007798;5.80e-08;75!UBERON:0004638;2.73e-07;18!UBERON:0001986;2.73e-07;18!UBERON:0004852;2.73e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.22e-56,8;UBERON:0004536,1.22e-56,8;UBERON:0006558,1.22e-56,8;UBERON:0002465,1.77e-45,10;UBERON:0010523,1.23e-38,3;UBERON:0001915,1.23e-38,3;UBERON:0001982,1.23e-38,3;UBERON:0000055,2.96e-15,68;UBERON:0002049,2.47e-13,78;UBERON:0007798,2.47e-13,78;UBERON:0004535,1.33e-09,109;UBERON:0001009,2.37e-09,112;UBERON:0004638,2.68e-07,18;UBERON:0001986,2.68e-07,18;UBERON:0004852,2.68e-07,18 | |||
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| ||
|short_description=p17@RASGRP3 | |short_description=p17@RASGRP3 | ||
}} | }} |
Latest revision as of 23:53, 16 September 2015
Short description: | p17@RASGRP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_RASGRP3_5end |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | 56bp_to_ENST00000497723_5end |
EntrezGene: | RASGRP3 |
HGNC: | 14545 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 3.19e-75 | 6 |
endothelial cell of lymphatic vessel | 3.19e-75 | 6 |
vascular lymphangioblast | 3.19e-75 | 6 |
endothelial cell of vascular tree | 1.73e-42 | 24 |
capillary endothelial cell | 1.23e-38 | 3 |
endothelial cell | 1.73e-28 | 36 |
meso-epithelial cell | 7.09e-23 | 45 |
lining cell | 7.88e-18 | 58 |
barrier cell | 7.88e-18 | 58 |
mesodermal cell | 1.15e-08 | 121 |
blood vessel endothelial cell | 2.68e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.68e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.22e-56 | 8 |
lymph vasculature | 1.22e-56 | 8 |
lymphatic part of lymphoid system | 1.22e-56 | 8 |
lymphoid system | 1.77e-45 | 10 |
microcirculatory vessel | 1.23e-38 | 3 |
endothelium of capillary | 1.23e-38 | 3 |
capillary | 1.23e-38 | 3 |
vessel | 2.96e-15 | 68 |
vasculature | 2.47e-13 | 78 |
vascular system | 2.47e-13 | 78 |
cardiovascular system | 1.33e-09 | 109 |
circulatory system | 2.37e-09 | 112 |
blood vessel endothelium | 2.68e-07 | 18 |
endothelium | 2.68e-07 | 18 |
cardiovascular system endothelium | 2.68e-07 | 18 |