FFCP PHASE1:Hg19::chr17:66597484..66597491,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54757 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23015 | |||
|TSSclassifier=strong | |||
|UniProt=Q96MK3,B7Z4Y3,Q8IYA5 | |||
|association_with_transcript=-389bp_to_ENST00000226094,NM_001243746,NM_017565,uc002jho.2,uc010wqp.1_5end | |||
|cluster_id=chr17:66597484..66597491,- | |||
|description=CAGE_peak_8_at_FAM20A_5end | |||
|id=chr17:66597484..66597491,- | |||
|ontology_enrichment_celltype=CL:0002322!4.24e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.90e-23;5!CL:0002619;1.25e-14;3!CL:0002321;1.19e-07;15!CL:0000039;7.92e-07;7!CL:0000586;7.92e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.48e-23,5;CL:0002619,1.87e-14,3;CL:0000039,6.24e-07,7;CL:0000586,6.24e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.23e-08;10!UBERON:0005564;7.23e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.60e-09!21;UBERON:0009196!1.60e-09!21;UBERON:0009117!1.60e-09!21;UBERON:0005564!1.60e-09!21;UBERON:0003135!2.36e-09!11;UBERON:0004176!6.61e-09!22;UBERON:0000473!1.25e-08!8;UBERON:0003101!1.35e-08!22;UBERON:0000079!1.35e-08!22;UBERON:0004458!2.02e-08!49;UBERON:0005057!1.84e-07!26;UBERON:0000062!2.01e-07!511;UBERON:0002323!2.12e-07!46;UBERON:0005156!2.35e-07!59;UBERON:0000990!2.35e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.76e-15;8!UBERON:0003135;1.20e-10;11!UBERON:0000991;1.25e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.55e-15,8;UBERON:0003135,1.00e-10,11;UBERON:0000991,1.14e-07,21;UBERON:0009196,1.14e-07,21;UBERON:0009117,1.14e-07,21;UBERON:0005564,1.14e-07,21;UBERON:0004145,2.39e-07,3;UBERON:0004176,2.71e-07,22 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0.446961094427288,0.872338524100369,0,1.26343974685366,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,2.01523926815932,1.29557466407592,1.28787783817093,0,0,0,0,0,0,0.863077176966451,0.768482119587302,0.945928919554341,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,1.27867425159808,0,0,0,1.00499466102697,1.5644487552606,0.434377689410233,0,0,0,0,0,0,0,0,0,0.570025487482497,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,1.62273696827342,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.860509862246441,0.709336764396714,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.901428353439581,0,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0.772921620136887,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,2.92736894711029,1.45782745153634,1.85910308591229,1.14027160516907,3.28017106138317,0.72995471815166,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,3.80265104465493,4.91413608338813,5.31710916013264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.5481500811197,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0,0.384417447767103,0,0.482561763430822,0,0.154209693802656,1.42049380250502,0.0821271560138091,0,0.232420756919918,0,0,0,0.574072240823034,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,1.6068392984416,0.290012154876366,0.616194468458578,0.15350367472613,0,0.214840489736547,0.725083469571143,0,0.534192213880424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.40945521474092,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0.545999645631943,0.282810863907425,3.39024349860728,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,2.96365403663912,0,1.04980416073495,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0.341826167541004,0,0,0,0.638002319463839,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,2.59064976476801,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0.134366944973453,0,0,0.315132729228895,0.412079291905832,0.404421263125109,0.393709926058995,0,0,0,0,0,0,0,0,0,0,1.89133697518076,0.367182116944987,0,0,0,0,0,0,1.62899880526114,0,0.326587360109409,0,0,0,0,3.3707013745959,1.32506888912221,0,0.13223260174269,0,0,0.961086713109252,0.943225830597996,1.24271716604159,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0.597019211547496,0.701139929541673,2.77402930751307,0.757612021100357,1.0062716070103,1.77962244319307,0,2.11723293268535,0,0,0.159296767163702,0,0.776314784381297,2.48823724704513,0,0,0.150257608997218,0,0,0.181848659202559,0,0.928067519756987,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0.351742488719241,0,0,0,0.606965604236632,0,0,0,0,0,0.131545547125698,0,0,0.235479278551542,0,0,0,0,0,0.643288897589907,0,0,0,0,0,0,0,2.58136415292167,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.187967835959707,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0.432626562123789,0,0.874124575709564,0,1.93778776509765,5.07713070004565,3.49200618232411,0.50141507858475,0.606229585745915,1.07185652062471,0,0,0.426467963801962,0,0.129177819672012,0.186224142887574,0,0.763765899337979,0.808468755832877,0,0,0,0.430333232356058,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p8@FAM20A | |||
}} |
Latest revision as of 00:31, 17 September 2015
Short description: | p8@FAM20A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FAM20A_5end |
Coexpression cluster: | NA |
Association with transcript: | -389bp_to_ENST00000226094, NM_001243746, NM_017565, uc002jho.2, uc010wqp.1_5end |
EntrezGene: | FAM20A |
HGNC: | 23015 |
UniProt: | Q96MK3B7Z4Y3Q8IYA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.48e-23 | 5 |
adult endothelial progenitor cell | 1.87e-14 | 3 |
germ line cell | 6.24e-07 | 7 |
germ cell | 6.24e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 7.55e-15 | 8 |
male reproductive organ | 1.00e-10 | 11 |
gonad | 1.14e-07 | 21 |
indifferent external genitalia | 1.14e-07 | 21 |
indifferent gonad | 1.14e-07 | 21 |
gonad primordium | 1.14e-07 | 21 |
outflow tract | 2.39e-07 | 3 |
external genitalia | 2.71e-07 | 22 |