FFCP PHASE1:Hg19::chr11:17741254..17741282,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4654 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7611 | |||
|TSSclassifier=strong | |||
|UniProt=P15172 | |||
|association_with_transcript=139bp_to_ENST00000250003_5end | |||
|cluster_id=chr11:17741254..17741282,+ | |||
|coexpression_cluster_id=C559 | |||
|description=CAGE_peak_2_at_MYOD1_5end | |||
|id=chr11:17741254..17741282,+ | |||
|ontology_enrichment_celltype=CL:0000188!1.42e-36!9;CL:0000515!6.61e-18!4;CL:0000680!4.58e-13!57;CL:0000056!4.58e-13!57;CL:0000355!4.58e-13!57;CL:0000594!7.39e-13!3;CL:0002603!8.69e-13!3;CL:0002586!9.43e-13!3;CL:0000183!1.27e-10!59;CL:0000149!1.11e-09!4;CL:0002575!2.15e-09!2;CL:0000187!1.62e-08!54;CL:0000393!2.01e-07!60;CL:0000211!2.01e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000056;1.75e-40;4!CL:0000188;1.18e-39;9!CL:0000680;1.08e-35;7!CL:0000515;7.76e-31;3!CL:0000228;1.87e-11;1!CL:0002372;1.87e-11;1!CL:0002321;5.21e-11;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,1.58e-40,4;CL:0000188,1.31e-39,9;CL:0000680,7.65e-13,58;CL:0000056,7.65e-13,58;CL:0000355,7.65e-13,58;CL:0000228,1.97e-11,1;CL:0002372,1.97e-11,1 | |||
|ontology_enrichment_development_v019=CL:0000515;1.75e-40;4!CL:0000355;2.23e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!2.76e-20!61;UBERON:0002036!2.76e-20!61;UBERON:0003082!2.76e-20!61;UBERON:0002385!1.71e-19!63;UBERON:0001015!1.71e-19!63;UBERON:0000383!1.71e-19!63;UBERON:0004290!4.46e-17!70;UBERON:0000486!6.64e-14!82;UBERON:0000914!1.11e-13!83;UBERON:0002329!1.11e-13!83;UBERON:0003077!1.11e-13!83;UBERON:0003059!1.11e-13!83;UBERON:0007282!1.11e-13!83;UBERON:0009618!1.11e-13!83;UBERON:0007285!1.11e-13!83;UBERON:0001781!9.43e-13!3;UBERON:0001782!9.43e-13!3;UBERON:0005424!9.43e-13!3;UBERON:0005256!7.83e-10!143;UBERON:0000475!9.00e-10!365;UBERON:0001630!1.74e-09!2;UBERON:0005090!1.74e-09!2;UBERON:0000490!2.77e-09!138;UBERON:0000341!5.76e-09!2;UBERON:0003104!1.99e-08!238;UBERON:0009142!1.99e-08!238;UBERON:0000966!7.91e-08!5;UBERON:0005388!7.91e-08!5;UBERON:0001802!7.91e-08!5;UBERON:0000481!1.12e-07!347;UBERON:0002100!1.67e-07!216;UBERON:0002204!8.94e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;8.61e-103;16!UBERON:0002036;8.61e-103;16!UBERON:0002385;1.40e-51;31!UBERON:0001015;1.40e-51;31!UBERON:0000383;1.40e-51;31!UBERON:0005090;1.83e-20;2!UBERON:0001630;1.83e-20;2!UBERON:0002426;3.12e-11;1!UBERON:0003831;3.12e-11;1!UBERON:0003898;3.12e-11;1!UBERON:0004830;3.12e-11;1!UBERON:0003830;3.12e-11;1!UBERON:0005175;3.12e-11;1!UBERON:0001774;3.12e-11;1!UBERON:0001103;3.12e-11;1!UBERON:0001389;5.43e-11;1!UBERON:0000026;5.43e-11;1!UBERON:0008784;5.43e-11;1!UBERON:0006058;5.43e-11;1!UBERON:0003663;5.43e-11;1!UBERON:0004256;5.43e-11;1!UBERON:0004708;5.43e-11;1!UBERON:0002101;5.43e-11;1!UBERON:0004709;5.43e-11;1!UBERON:0002529;5.43e-11;1!UBERON:0010538;5.43e-11;1!UBERON:0003661;5.43e-11;1!UBERON:0010890;5.43e-11;1!UBERON:0002471;5.43e-11;1!UBERON:0001383;5.43e-11;1!UBERON:0010758;5.43e-11;1!UBERON:0010707;5.43e-11;1!UBERON:0000978;5.43e-11;1!UBERON:0002103;5.43e-11;1!UBERON:0001665;5.43e-11;1!UBERON:0003823;5.43e-11;1!UBERON:0000154;5.43e-11;1!UBERON:0010709;5.43e-11;1!UBERON:0002204;1.24e-10;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.53e-25,62;UBERON:0002036,3.53e-25,62;UBERON:0003082,3.53e-25,62;UBERON:0002385,2.48e-24,64;UBERON:0001015,2.48e-24,64;UBERON:0000383,2.48e-24,64;UBERON:0002329,9.63e-22,71;UBERON:0003059,9.63e-22,71;UBERON:0007282,9.63e-22,71;UBERON:0004290,9.63e-22,71;UBERON:0009618,9.63e-22,71;UBERON:0003077,2.05e-21,72;UBERON:0007285,2.05e-21,72;UBERON:0007524,4.29e-21,73;UBERON:0005090,2.12e-20,2;UBERON:0001630,2.12e-20,2;UBERON:0007503,1.29e-19,78;UBERON:0000486,2.57e-18,83;UBERON:0005256,7.54e-14,122;UBERON:0002426,3.63e-11,1;UBERON:0003831,3.63e-11,1;UBERON:0003898,3.63e-11,1;UBERON:0004830,3.63e-11,1;UBERON:0003830,3.63e-11,1;UBERON:0005175,3.63e-11,1;UBERON:0001774,3.63e-11,1;UBERON:0001103,3.63e-11,1;UBERON:0010084,3.63e-11,1;UBERON:0000490,4.96e-11,148;UBERON:0005418,5.43e-11,1;UBERON:0001389,5.43e-11,1;UBERON:0000026,5.43e-11,1;UBERON:0008784,5.43e-11,1;UBERON:0006058,5.43e-11,1;UBERON:0003663,5.43e-11,1;UBERON:0004256,5.43e-11,1;UBERON:0004708,5.43e-11,1;UBERON:0002101,5.43e-11,1;UBERON:0004709,5.43e-11,1;UBERON:0002529,5.43e-11,1;UBERON:0010538,5.43e-11,1;UBERON:0003661,5.43e-11,1;UBERON:0010890,5.43e-11,1;UBERON:0002471,5.43e-11,1;UBERON:0001383,5.43e-11,1;UBERON:0004357,5.43e-11,1;UBERON:0004347,5.43e-11,1;UBERON:0005420,5.43e-11,1;UBERON:0005732,5.43e-11,1;UBERON:0010758,5.43e-11,1;UBERON:0010707,5.43e-11,1;UBERON:0000978,5.43e-11,1;UBERON:0002103,5.43e-11,1;UBERON:0001665,5.43e-11,1;UBERON:0003823,5.43e-11,1;UBERON:0000154,5.43e-11,1;UBERON:0010709,5.43e-11,1;UBERON:0005733,5.43e-11,1;UBERON:0005730,5.43e-11,1;UBERON:0003104,4.89e-10,160;UBERON:0009142,4.89e-10,160;UBERON:0002100,6.39e-09,199;UBERON:0002204,5.06e-08,167 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,3.26401105990805,0.940364164434263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.70547620162874,5.93603357337075,4.31500277355805,11.997084537073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,20.2454620048405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.984043937099117,0.325378394664303,0,0,0,0,0,0,34.898129303456,0.462145851343933,2.14905144616581,4.13509717453592,0.322260734604821,0.725083469571143,3.40906509664404,11.8412607410161,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21031058919516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.6021934083891,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.64976398131349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,1.43727929598746,22.0364741954258,0.971421986118279,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.714193294391221,0,0,0,0,0,0.435433495793923,3.76456631193809,0.134704106029175,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@MYOD1 | |||
}} |
Latest revision as of 00:42, 17 September 2015
Short description: | p2@MYOD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYOD1_5end |
Coexpression cluster: | C559_Skeletal_Pericytes_mesenchymal_Myoblast_rhabdomyosarcoma_skeletal_tongue |
Association with transcript: | 139bp_to_ENST00000250003_5end |
EntrezGene: | MYOD1 |
HGNC: | 7611 |
UniProt: | P15172 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 1.58e-40 | 4 |
cell of skeletal muscle | 1.31e-39 | 9 |
muscle precursor cell | 7.65e-13 | 58 |
myoblast | 7.65e-13 | 58 |
multi-potent skeletal muscle stem cell | 7.65e-13 | 58 |
multinucleate cell | 1.97e-11 | 1 |
myotube | 1.97e-11 | 1 |