FFCP PHASE1:Hg19::chr17:67138089..67138092,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23460 | |EntrezGene=23460 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=36 | |HGNC=36 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N139 | |UniProt=Q8N139 | ||
|association_with_transcript=-74bp_to_ENST00000284425,NM_080284,uc002jhw.1,uc002jhy.2_5end | |association_with_transcript=-74bp_to_ENST00000284425,NM_080284,uc002jhw.1,uc002jhy.2_5end | ||
|cluster_id=chr17:67138089..67138092,- | |||
|description=CAGE_peak_7_at_ABCA6_5end | |description=CAGE_peak_7_at_ABCA6_5end | ||
|id=chr17:67138089..67138092,- | |id=chr17:67138089..67138092,- | ||
|ontology_enrichment_celltype=CL:0000746!1.12e-07!3;CL:0000513!1.12e-07!3 | |ontology_enrichment_celltype=CL:0000746!1.12e-07!3;CL:0000513!1.12e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000746;9.29e-28;3!CL:0000737;4.23e-21;4!CL:0002591;5.16e-21;1!CL:0002494;6.49e-12;16!CL:0000182;1.57e-07;12 | |ontology_enrichment_celltype_v019=CL:0000746;9.29e-28;3!CL:0000737;4.23e-21;4!CL:0002591;5.16e-21;1!CL:0002494;6.49e-12;16!CL:0000182;1.57e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000746,8.12e-28,3;CL:0000513,8.12e-28,3;CL:0000737,3.82e-21,4;CL:0002591,7.72e-21,1;CL:0002494,6.02e-12,16;CL:0000182,1.47e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000513;9.29e-28;3 | |ontology_enrichment_development_v019=CL:0000513;9.29e-28;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.26e-20!115;UBERON:0007100!6.52e-13!27;UBERON:0000477!4.05e-12!286;UBERON:0002298!5.05e-12!8;UBERON:0004111!3.45e-11!241;UBERON:0000948!9.47e-11!24;UBERON:0005498!9.47e-11!24;UBERON:0004140!9.47e-11!24;UBERON:0009881!9.47e-11!24;UBERON:0004141!9.47e-11!24;UBERON:0003084!9.47e-11!24;UBERON:0007005!9.47e-11!24;UBERON:0004139!9.47e-11!24;UBERON:0004291!9.47e-11!24;UBERON:0000025!1.08e-09!194;UBERON:0003103!1.80e-08!69;UBERON:0001009!2.86e-08!113;UBERON:0003076!1.66e-07!15;UBERON:0003057!1.66e-07!15;UBERON:0004872!1.72e-07!84;UBERON:0004145!2.21e-07!3;UBERON:0000483!3.13e-07!309;UBERON:0004535!4.15e-07!110;UBERON:0000119!4.85e-07!312;UBERON:0000988!8.69e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!5.26e-20!115;UBERON:0007100!6.52e-13!27;UBERON:0000477!4.05e-12!286;UBERON:0002298!5.05e-12!8;UBERON:0004111!3.45e-11!241;UBERON:0000948!9.47e-11!24;UBERON:0005498!9.47e-11!24;UBERON:0004140!9.47e-11!24;UBERON:0009881!9.47e-11!24;UBERON:0004141!9.47e-11!24;UBERON:0003084!9.47e-11!24;UBERON:0007005!9.47e-11!24;UBERON:0004139!9.47e-11!24;UBERON:0004291!9.47e-11!24;UBERON:0000025!1.08e-09!194;UBERON:0003103!1.80e-08!69;UBERON:0001009!2.86e-08!113;UBERON:0003076!1.66e-07!15;UBERON:0003057!1.66e-07!15;UBERON:0004872!1.72e-07!84;UBERON:0004145!2.21e-07!3;UBERON:0000483!3.13e-07!309;UBERON:0004535!4.15e-07!110;UBERON:0000119!4.85e-07!312;UBERON:0000988!8.69e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000078;3.34e-11;2!UBERON:0002012;3.34e-11;2!UBERON:0008886;3.34e-11;2!UBERON:0002107;5.35e-10;19!UBERON:0006925;5.35e-10;19!UBERON:0000948;7.82e-09;22!UBERON:0001723;6.78e-08;3!UBERON:0001033;6.78e-08;3!UBERON:0007100;7.66e-08;25!UBERON:0002423;9.68e-08;25 | |ontology_enrichment_uberon_v019=UBERON:0000078;3.34e-11;2!UBERON:0002012;3.34e-11;2!UBERON:0008886;3.34e-11;2!UBERON:0002107;5.35e-10;19!UBERON:0006925;5.35e-10;19!UBERON:0000948;7.82e-09;22!UBERON:0001723;6.78e-08;3!UBERON:0001033;6.78e-08;3!UBERON:0007100;7.66e-08;25!UBERON:0002423;9.68e-08;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,1.15e-13,24;UBERON:0005498,1.15e-13,24;UBERON:0004140,1.15e-13,24;UBERON:0009881,1.15e-13,24;UBERON:0004141,1.15e-13,24;UBERON:0003084,1.15e-13,24;UBERON:0007005,1.15e-13,24;UBERON:0004139,1.15e-13,24;UBERON:0004291,1.15e-13,24;UBERON:0007100,3.43e-12,27;UBERON:0000078,4.09e-11,2;UBERON:0007497,4.09e-11,2;UBERON:0003643,4.09e-11,2;UBERON:0003504,4.09e-11,2;UBERON:0003469,4.09e-11,2;UBERON:0003496,4.09e-11,2;UBERON:0002012,4.09e-11,2;UBERON:0008886,4.09e-11,2;UBERON:0007303,4.09e-11,2;UBERON:0002061,4.09e-11,2;UBERON:0005432,4.09e-11,2;UBERON:0004363,4.09e-11,2;UBERON:0002107,5.18e-10,19;UBERON:0006925,5.18e-10,19;UBERON:0008836,5.18e-10,19;UBERON:0001042,8.96e-09,10;UBERON:0009145,8.96e-09,10;UBERON:0008835,9.94e-09,22;UBERON:0003894,9.94e-09,22;UBERON:0009854,2.25e-08,23;UBERON:0003914,4.55e-08,117;UBERON:0006562,4.66e-08,11;UBERON:0004145,7.76e-08,3;UBERON:0001723,8.29e-08,3;UBERON:0001033,8.29e-08,3;UBERON:0010056,8.29e-08,3;UBERON:0007499,9.46e-08,25;UBERON:0009497,9.46e-08,25;UBERON:0000015,9.46e-08,25;UBERON:0002423,9.46e-08,25;UBERON:0006235,9.46e-08,25;UBERON:0004161,9.46e-08,25;UBERON:0009856,1.79e-07,26;UBERON:0003103,2.08e-07,68 | |||
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| ||
|short_description=p7@ABCA6 | |short_description=p7@ABCA6 | ||
}} | }} |
Latest revision as of 01:05, 17 September 2015
Short description: | p7@ABCA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ABCA6_5end |
Coexpression cluster: | NA |
Association with transcript: | -74bp_to_ENST00000284425, NM_080284, uc002jhw.1, uc002jhy.2_5end |
EntrezGene: | ABCA6 |
HGNC: | 36 |
UniProt: | Q8N139 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 8.12e-28 | 3 |
cardiac muscle myoblast | 8.12e-28 | 3 |
striated muscle cell | 3.82e-21 | 4 |
smooth muscle cell of the pulmonary artery | 7.72e-21 | 1 |
cardiocyte | 6.02e-12 | 16 |
hepatocyte | 1.47e-07 | 12 |