FFCP PHASE1:Hg19::chr1:24915966..24915971,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=400746 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29332 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=11bp_to_ENST00000486262_5end | |||
|cluster_id=chr1:24915966..24915971,+ | |||
|coexpression_cluster_id=C801 | |||
|description=CAGE_peak_5_at_C1orf130_5end | |||
|id=chr1:24915966..24915971,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;5.96e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!1.30e-28!3;UBERON:0007023!1.69e-28!115;UBERON:0003076!1.42e-21!15;UBERON:0003057!1.42e-21!15;UBERON:0000341!2.86e-19!2;UBERON:0002298!1.68e-18!8;UBERON:0005174!1.97e-17!5;UBERON:0001137!1.97e-17!5;UBERON:0001896!3.79e-13!3;UBERON:0005290!3.79e-13!3;UBERON:0010096!3.79e-13!3;UBERON:0002038!6.73e-11!1;UBERON:0009661!6.73e-11!1;UBERON:0001831!1.19e-10!1;UBERON:0001567!1.19e-10!1;UBERON:0008801!1.19e-10!1;UBERON:0002372!4.33e-10!1;UBERON:0001961!4.33e-10!1;UBERON:0001744!4.33e-10!1;UBERON:0001735!4.33e-10!1;UBERON:0002363!4.75e-10!1;UBERON:0007647!4.75e-10!1;UBERON:0010115!4.75e-10!1;UBERON:0001049!3.54e-09!57;UBERON:0005068!3.54e-09!57;UBERON:0006241!3.54e-09!57;UBERON:0007135!3.54e-09!57;UBERON:0003075!4.71e-09!86;UBERON:0007284!4.71e-09!86;UBERON:0005743!6.21e-09!86;UBERON:0002346!1.37e-08!90;UBERON:0000073!5.79e-08!94;UBERON:0001016!5.79e-08!94;UBERON:0001017!1.42e-07!82;UBERON:0004733!2.58e-07!12;UBERON:0002028!2.58e-07!12;UBERON:0007277!2.58e-07!12;UBERON:0004121!7.84e-07!169;UBERON:0004732!8.71e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;9.37e-99;1!UBERON:0009661;9.37e-99;1!UBERON:0002950;9.37e-99;1!UBERON:0001891;9.37e-99;1!UBERON:0000966;5.15e-21;5!UBERON:0005388;5.15e-21;5!UBERON:0001802;5.15e-21;5!UBERON:0009663;1.65e-15;7!UBERON:0002420;2.19e-12;9!UBERON:0000125;2.19e-12;9!UBERON:0007245;2.19e-12;9!UBERON:0002308;2.19e-12;9!UBERON:0010009;2.19e-12;9!UBERON:0010011;2.19e-12;9!UBERON:0000454;2.19e-12;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,9.37e-99,1;UBERON:0009661,9.37e-99,1;UBERON:0002950,9.37e-99,1;UBERON:0001891,9.37e-99,1;UBERON:0009616,9.37e-99,1;UBERON:0010286,9.37e-99,1;UBERON:0000966,9.07e-18,6;UBERON:0005388,9.07e-18,6;UBERON:0001802,9.07e-18,6;UBERON:0009663,1.65e-15,7;UBERON:0002420,2.19e-12,9;UBERON:0000125,2.19e-12,9;UBERON:0007245,2.19e-12,9;UBERON:0002308,2.19e-12,9;UBERON:0010009,2.19e-12,9;UBERON:0010011,2.19e-12,9;UBERON:0000454,2.19e-12,9;UBERON:0003056,1.20e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0.606965604236632,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,1.71543706023975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981542335574726,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0,2.29343333042322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.476128862927481,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p5@C1orf130 | |||
}} |
Latest revision as of 01:32, 17 September 2015
Short description: | p5@C1orf130 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C1orf130_5end |
Coexpression cluster: | C801_substantia_spinal_medulla_retina_pineal_penis_tongue |
Association with transcript: | 11bp_to_ENST00000486262_5end |
EntrezGene: | C1orf130 |
HGNC: | 29332 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
substantia nigra | 9.37e-99 | 1 |
midbrain nucleus | 9.37e-99 | 1 |
regional part of midbrain | 9.37e-99 | 1 |
midbrain | 9.37e-99 | 1 |
presumptive midbrain | 9.37e-99 | 1 |
midbrain neural tube | 9.37e-99 | 1 |
retina | 9.07e-18 | 6 |
photoreceptor array | 9.07e-18 | 6 |
posterior segment of eyeball | 9.07e-18 | 6 |
telencephalic nucleus | 1.65e-15 | 7 |
basal ganglion | 2.19e-12 | 9 |
neural nucleus | 2.19e-12 | 9 |
nuclear complex of neuraxis | 2.19e-12 | 9 |
nucleus of brain | 2.19e-12 | 9 |
aggregate regional part of brain | 2.19e-12 | 9 |
collection of basal ganglia | 2.19e-12 | 9 |
cerebral subcortex | 2.19e-12 | 9 |
pre-chordal neural plate | 1.20e-07 | 61 |