FFCP PHASE1:Hg19::chr1:151826151..151826159,-: Difference between revisions
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|id=chr1:151826151..151826159,-
|short_description=p3@THEM5
|description=CAGE_peak_3_at_THEM5_5end
|association_with_transcript=13bp_to_ENST00000368817,NM_182578,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=284486 | |EntrezGene=284486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26755 | |HGNC=26755 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N1Q8 | |UniProt=Q8N1Q8 | ||
|association_with_transcript=13bp_to_ENST00000368817,NM_182578,uc009wnd.2_5end | |||
|cluster_id=chr1:151826151..151826159,- | |||
|coexpression_cluster_id=C441 | |||
|description=CAGE_peak_3_at_THEM5_5end | |||
|id=chr1:151826151..151826159,- | |||
|ontology_enrichment_celltype=CL:0002150!9.17e-18!3;CL:0000861!9.17e-18!3;CL:0000764!1.02e-12!2;CL:0000765!1.02e-12!2;CL:0000050!1.02e-12!2;CL:0000038!1.02e-12!2;CL:0000558!1.02e-12!2;CL:0000547!1.02e-12!2;CL:0000549!1.02e-12!2;CL:0000550!1.02e-12!2;CL:0000552!1.02e-12!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;2.56e-98;2!CL:0000558;2.56e-98;2!CL:0002623;9.45e-18;3!CL:0000622;3.26e-11;5!CL:0000154;1.44e-09;6!CL:0000150;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.22e-98,2;CL:0000765,4.22e-98,2;CL:0000050,4.22e-98,2;CL:0000038,4.22e-98,2;CL:0000558,4.22e-98,2;CL:0000547,4.22e-98,2;CL:0000549,4.22e-98,2;CL:0000550,4.22e-98,2;CL:0000552,4.22e-98,2;CL:0002623,8.00e-18,3;CL:0000622,2.94e-11,5;CL:0000154,1.32e-09,6;CL:0000150,7.91e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3151!2.95e-07!1;DOID:3149!2.95e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3151;1.46e-50;1!DOID:3149;1.46e-50;1!DOID:3451;4.32e-26;2!DOID:4159;4.32e-26;2!DOID:0060122;4.32e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.46e-50,1;DOID:3149,1.46e-50,1;DOID:3451,4.32e-26,2;DOID:4159,4.32e-26,2;DOID:0060122,4.32e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.25e-12!115;UBERON:0001950!2.23e-11!20;UBERON:0002619!2.58e-10!22;UBERON:0000956!5.01e-09!25;UBERON:0000203!5.01e-09!25;UBERON:0001869!5.84e-09!32;UBERON:0001893!2.21e-08!34;UBERON:0001723!2.46e-08!3;UBERON:0001033!2.46e-08!3;UBERON:0010056!2.46e-08!3;UBERON:0003978!3.67e-08!3;UBERON:0009751!3.67e-08!3;UBERON:0000946!3.67e-08!3;UBERON:0002523!3.67e-08!3;UBERON:0005983!3.67e-08!3;UBERON:0002165!3.67e-08!3;UBERON:0002062!3.67e-08!3;UBERON:0007280!3.67e-08!3;UBERON:0007029!3.73e-07!1;UBERON:0000989!5.26e-07!1;UBERON:0008811!5.26e-07!1;UBERON:0006258!5.26e-07!1;UBERON:0005876!5.26e-07!1;UBERON:0004874!5.26e-07!1;UBERON:0000997!5.89e-07!1;UBERON:0005056!5.89e-07!1;UBERON:0002780!8.47e-07!41;UBERON:0001890!8.47e-07!41;UBERON:0006240!8.47e-07!41;UBERON:0002135!8.75e-07!1;UBERON:0000014!9.02e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000014;8.81e-14;4!UBERON:0001044;1.44e-09;6!UBERON:0003293;1.44e-09;6!UBERON:0003294;1.44e-09;6!UBERON:0010047;1.44e-09;6!UBERON:0003408;1.44e-09;6!UBERON:0000167;1.44e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,8.82e-14,4;UBERON:0001044,1.32e-09,6;UBERON:0003293,1.32e-09,6;UBERON:0003294,1.32e-09,6;UBERON:0010047,1.32e-09,6;UBERON:0000167,1.32e-09,6 | |||
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|short_description=p3@THEM5 | |||
}} | }} |
Latest revision as of 01:50, 17 September 2015
Short description: | p3@THEM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_THEM5_5end |
Coexpression cluster: | C441_keratoacanthoma_skin_tongue_esophagus_cervical_salivary_Sebocyte |
Association with transcript: | 13bp_to_ENST00000368817, NM_182578, uc009wnd.2_5end |
EntrezGene: | THEM5 |
HGNC: | 26755 |
UniProt: | Q8N1Q8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.22e-98 | 2 |
erythroblast | 4.22e-98 | 2 |
megakaryocyte-erythroid progenitor cell | 4.22e-98 | 2 |
erythroid progenitor cell | 4.22e-98 | 2 |
reticulocyte | 4.22e-98 | 2 |
proerythroblast | 4.22e-98 | 2 |
basophilic erythroblast | 4.22e-98 | 2 |
polychromatophilic erythroblast | 4.22e-98 | 2 |
orthochromatic erythroblast | 4.22e-98 | 2 |
acinar cell of salivary gland | 8.00e-18 | 3 |
acinar cell | 2.94e-11 | 5 |
protein secreting cell | 1.32e-09 | 6 |
glandular epithelial cell | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 8.82e-14 | 4 |
saliva-secreting gland | 1.32e-09 | 6 |
gland of oral region | 1.32e-09 | 6 |
gland of foregut | 1.32e-09 | 6 |
oral gland | 1.32e-09 | 6 |
oral cavity | 1.32e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.46e-50 | 1 |
keratoacanthoma | 1.46e-50 | 1 |
skin carcinoma | 4.32e-26 | 2 |
skin cancer | 4.32e-26 | 2 |
integumentary system cancer | 4.32e-26 | 2 |