FFCP PHASE1:Hg19::chr5:172755410..172755426,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8614 | |EntrezGene=8614 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11374 | |HGNC=11374 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_ENST00000519511_5end | |association_with_transcript=23bp_to_ENST00000519511_5end | ||
|cluster_id=chr5:172755410..172755426,- | |||
|coexpression_cluster_id=C2818 | |||
|description=CAGE_peak_1_at_STC2_5end | |description=CAGE_peak_1_at_STC2_5end | ||
|id=chr5:172755410..172755426,- | |id=chr5:172755410..172755426,- | ||
|ontology_enrichment_celltype=CL:0000055!3.34e-27!180;CL:0000057!1.95e-17!75;CL:0002321!5.98e-17!248;CL:0000220!1.19e-16!246;CL:0000548!7.72e-14!679;CL:0000004!7.72e-14!679;CL:0000255!7.72e-14!679;CL:0000012!6.57e-13!682;CL:0000680!2.41e-12!57;CL:0000056!2.41e-12!57;CL:0000355!2.41e-12!57;CL:0000222!1.00e-11!119;CL:0000066!3.64e-11!254;CL:0000192!5.43e-11!42;CL:0000514!5.43e-11!42;CL:0000359!6.24e-11!32;CL:0000187!8.31e-11!54;CL:0000183!1.64e-10!59;CL:0000393!6.78e-10!60;CL:0000211!6.78e-10!60;CL:0000144!1.04e-07!625 | |ontology_enrichment_celltype=CL:0000055!3.34e-27!180;CL:0000057!1.95e-17!75;CL:0002321!5.98e-17!248;CL:0000220!1.19e-16!246;CL:0000548!7.72e-14!679;CL:0000004!7.72e-14!679;CL:0000255!7.72e-14!679;CL:0000012!6.57e-13!682;CL:0000680!2.41e-12!57;CL:0000056!2.41e-12!57;CL:0000355!2.41e-12!57;CL:0000222!1.00e-11!119;CL:0000066!3.64e-11!254;CL:0000192!5.43e-11!42;CL:0000514!5.43e-11!42;CL:0000359!6.24e-11!32;CL:0000187!8.31e-11!54;CL:0000183!1.64e-10!59;CL:0000393!6.78e-10!60;CL:0000211!6.78e-10!60;CL:0000144!1.04e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.03e-10;32!CL:0000192;1.31e-08;43!CL:0000057;2.65e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.46e-18,76;CL:0002321,2.35e-17,250;CL:0000680,9.93e-13,58;CL:0000056,9.93e-13,58;CL:0000355,9.93e-13,58;CL:0000222,6.79e-12,121;CL:0000192,2.31e-11,43;CL:0000514,2.31e-11,43;CL:0000187,3.60e-11,55;CL:0000066,4.22e-11,253;CL:0000359,5.06e-11,32;CL:0000393,3.06e-10,61;CL:0000211,3.06e-10,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.31e-08;43!CL:0000355;6.16e-07;58 | |||
|ontology_enrichment_disease=DOID:0050687!3.73e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.45e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002100!3.55e-21!216;UBERON:0000475!5.43e-15!365;UBERON:0003104!1.02e-14!238;UBERON:0009142!1.02e-14!238;UBERON:0005256!1.19e-13!143;UBERON:0000490!1.18e-12!138;UBERON:0004872!3.33e-12!84;UBERON:0001637!4.94e-12!42;UBERON:0003509!4.94e-12!42;UBERON:0004572!4.94e-12!42;UBERON:0000914!5.24e-12!83;UBERON:0002329!5.24e-12!83;UBERON:0003077!5.24e-12!83;UBERON:0003059!5.24e-12!83;UBERON:0007282!5.24e-12!83;UBERON:0009618!5.24e-12!83;UBERON:0007285!5.24e-12!83;UBERON:0004290!6.49e-12!70;UBERON:0003914!7.95e-12!118;UBERON:0000486!1.09e-11!82;UBERON:0001134!2.17e-11!61;UBERON:0002036!2.17e-11!61;UBERON:0003082!2.17e-11!61;UBERON:0000481!6.48e-11!347;UBERON:0002385!9.72e-11!63;UBERON:0001015!9.72e-11!63;UBERON:0000383!9.72e-11!63;UBERON:0004573!3.49e-10!33;UBERON:0004571!3.49e-10!33;UBERON:0003102!7.70e-10!95;UBERON:0001048!1.29e-09!168;UBERON:0001981!3.29e-09!60;UBERON:0007500!3.29e-09!60;UBERON:0004537!3.29e-09!60;UBERON:0006965!3.29e-09!60;UBERON:0000119!4.59e-09!312;UBERON:0002049!4.85e-09!79;UBERON:0007798!4.85e-09!79;UBERON:0000483!7.83e-09!309;UBERON:0000468!2.17e-08!659;UBERON:0000466!2.53e-08!126;UBERON:0009569!4.26e-08!113;UBERON:0000055!4.74e-08!69;UBERON:0000464!1.71e-07!104;UBERON:0004119!3.10e-07!169;UBERON:0000925!3.10e-07!169;UBERON:0006595!3.10e-07!169;UBERON:0002199!7.66e-07!45;UBERON:0002416!7.66e-07!45;UBERON:0002097!8.98e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.67e-09;33!UBERON:0004571;3.67e-09;33!UBERON:0001637;1.01e-08;42!UBERON:0003509;1.01e-08;42!UBERON:0004572;1.01e-08;42 | |||
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| ||
|short_description=p1@STC2 | |short_description=p1@STC2 | ||
}} | }} |
Latest revision as of 01:54, 17 September 2015
Short description: | p1@STC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STC2_5end |
Coexpression cluster: | C2818_Smooth_Multipotent_hepatic_Preadipocyte_mesothelioma_Fibroblast_mesenchymal |
Association with transcript: | 23bp_to_ENST00000519511_5end |
EntrezGene: | STC2 |
HGNC: | 11374 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.46e-18 | 76 |
embryonic cell | 2.35e-17 | 250 |
muscle precursor cell | 9.93e-13 | 58 |
myoblast | 9.93e-13 | 58 |
multi-potent skeletal muscle stem cell | 9.93e-13 | 58 |
mesodermal cell | 6.79e-12 | 121 |
smooth muscle cell | 2.31e-11 | 43 |
smooth muscle myoblast | 2.31e-11 | 43 |
muscle cell | 3.60e-11 | 55 |
epithelial cell | 4.22e-11 | 253 |
vascular associated smooth muscle cell | 5.06e-11 | 32 |
electrically responsive cell | 3.06e-10 | 61 |
electrically active cell | 3.06e-10 | 61 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.45e-07 | 143 |