FFCP PHASE1:Hg19::chr5:173043615..173043688,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:173043615..173043688,- to FFCP PHASE1:Hg19::chr5:173043615..173043688,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=91272 | |EntrezGene=91272 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25114 | |HGNC=25114 | ||
|TSSclassifier=strong | |||
|UniProt=Q96IK1,C9JNZ5 | |UniProt=Q96IK1,C9JNZ5 | ||
|association_with_transcript=0bp_to_ENST00000311086,ENST00000471339,ENST00000480951,NM_001159651,NM_138369,uc003mcq.2,uc003mcr.2_5end | |||
|cluster_id=chr5:173043615..173043688,- | |||
|description=CAGE_peak_1_at_BOD1_5end | |||
|id=chr5:173043615..173043688,- | |||
|ontology_enrichment_celltype=CL:0000066!2.07e-19!254;CL:0002321!5.00e-14!248;CL:0000220!2.81e-13!246;CL:0000055!7.98e-11!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.47e-19,253;CL:0002321,1.02e-14,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!9.70e-18!143;DOID:305!2.50e-16!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,9.70e-18,143;DOID:305,2.50e-16,106 | |||
|ontology_enrichment_uberon=UBERON:0000481!9.15e-15!347;UBERON:0000475!1.18e-13!365;UBERON:0000468!1.43e-11!659;UBERON:0002100!1.72e-11!216;UBERON:0000466!7.25e-10!126;UBERON:0003104!1.30e-09!238;UBERON:0009142!1.30e-09!238;UBERON:0000119!9.52e-09!312;UBERON:0000922!9.90e-09!612;UBERON:0000464!1.01e-08!104;UBERON:0004119!1.52e-08!169;UBERON:0000925!1.52e-08!169;UBERON:0006595!1.52e-08!169;UBERON:0001048!1.69e-08!168;UBERON:0000483!3.39e-08!309;UBERON:0001007!9.62e-08!155;UBERON:0001555!9.62e-08!155;UBERON:0007026!9.62e-08!155;UBERON:0000923!4.52e-07!604;UBERON:0005291!4.52e-07!604;UBERON:0006598!4.52e-07!604;UBERON:0002532!4.52e-07!604;UBERON:0002050!4.61e-07!605;UBERON:0005423!4.61e-07!605;UBERON:0002553!9.15e-07!70 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,9.21e-12,199;UBERON:0000119,9.54e-09,309;UBERON:0000483,3.40e-08,306;UBERON:0003104,1.96e-07,160;UBERON:0009142,1.96e-07,160;UBERON:0004119,6.45e-07,160;UBERON:0000925,6.45e-07,160;UBERON:0006595,6.45e-07,160;UBERON:0005177,9.80e-07,101 | |||
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| ||
|short_description=p1@BOD1 | |||
}} | }} |
Latest revision as of 02:17, 17 September 2015
Short description: | p1@BOD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BOD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000311086, ENST00000471339, ENST00000480951, NM_001159651, NM_138369, uc003mcq.2, uc003mcr.2_5end |
EntrezGene: | BOD1 |
HGNC: | 25114 |
UniProt: | Q96IK1C9JNZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.47e-19 | 253 |
embryonic cell | 1.02e-14 | 250 |
Ontology term | p-value | n |
---|---|---|
trunk | 9.21e-12 | 199 |
cell layer | 9.54e-09 | 309 |
epithelium | 3.40e-08 | 306 |
mesenchyme | 1.96e-07 | 160 |
entire embryonic mesenchyme | 1.96e-07 | 160 |
endoderm-derived structure | 6.45e-07 | 160 |
endoderm | 6.45e-07 | 160 |
presumptive endoderm | 6.45e-07 | 160 |
trunk region element | 9.80e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 9.70e-18 | 143 |
carcinoma | 2.50e-16 | 106 |