FFCP PHASE1:Hg19::chr15:29131270..29131360,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=321 | |EntrezGene=321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=579 | |HGNC=579 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000559709,ENST00000559814_5end | |association_with_transcript=0bp_to_ENST00000559709,ENST00000559814_5end | ||
|cluster_id=chr15:29131270..29131360,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_APBA2_5end | |description=CAGE_peak_1_at_APBA2_5end | ||
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|ontology_enrichment_celltype=CL:0000791!3.56e-08!18;CL:0000789!3.56e-08!18;CL:0002420!3.56e-08!18;CL:0002419!3.56e-08!18;CL:0000790!3.56e-08!18;CL:0000625!5.35e-07!11 | |ontology_enrichment_celltype=CL:0000791!3.56e-08!18;CL:0000789!3.56e-08!18;CL:0002420!3.56e-08!18;CL:0002419!3.56e-08!18;CL:0000790!3.56e-08!18;CL:0000625!5.35e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.33e-08;18!CL:0000789;1.33e-08;18!CL:0002419;1.33e-08;18!CL:0000625;1.76e-07;11 | |ontology_enrichment_celltype_v019=CL:0000791;1.33e-08;18!CL:0000789;1.33e-08;18!CL:0002419;1.33e-08;18!CL:0000625;1.76e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.52e-08,18;CL:0000789,1.52e-08,18;CL:0002420,1.52e-08,18;CL:0002419,1.52e-08,18;CL:0000790,1.52e-08,18;CL:0000625,1.91e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.33e-08;18 | |ontology_enrichment_development_v019=CL:0000790;1.33e-08;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.37e-20;32!UBERON:0001893;2.98e-20;34!UBERON:0002791;3.04e-20;32!UBERON:0003528;3.04e-20;34!UBERON:0002020;3.04e-20;34!UBERON:0000956;1.34e-18;25!UBERON:0000203;1.34e-18;25!UBERON:0002780;1.56e-17;41!UBERON:0001890;1.56e-17;41!UBERON:0000073;2.07e-17;53!UBERON:0002616;2.07e-17;53!UBERON:0002619;2.20e-17;22!UBERON:0001950;5.48e-16;20!UBERON:0001017;6.44e-14;75!UBERON:0000955;1.33e-13;68!UBERON:0001016;6.57e-13;83!UBERON:0004732;2.37e-08;13!UBERON:0004733;8.70e-08;12!UBERON:0002028;8.70e-08;12 | |ontology_enrichment_uberon_v019=UBERON:0001869;1.37e-20;32!UBERON:0001893;2.98e-20;34!UBERON:0002791;3.04e-20;32!UBERON:0003528;3.04e-20;34!UBERON:0002020;3.04e-20;34!UBERON:0000956;1.34e-18;25!UBERON:0000203;1.34e-18;25!UBERON:0002780;1.56e-17;41!UBERON:0001890;1.56e-17;41!UBERON:0000073;2.07e-17;53!UBERON:0002616;2.07e-17;53!UBERON:0002619;2.20e-17;22!UBERON:0001950;5.48e-16;20!UBERON:0001017;6.44e-14;75!UBERON:0000955;1.33e-13;68!UBERON:0001016;6.57e-13;83!UBERON:0004732;2.37e-08;13!UBERON:0004733;8.70e-08;12!UBERON:0002028;8.70e-08;12 | ||
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| ||
|short_description=p1@APBA2 | |short_description=p1@APBA2 | ||
}} | }} |
Latest revision as of 02:20, 17 September 2015
Short description: | p1@APBA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_APBA2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000559709, ENST00000559814_5end |
EntrezGene: | APBA2 |
HGNC: | 579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.52e-08 | 18 |
alpha-beta T cell | 1.52e-08 | 18 |
immature T cell | 1.52e-08 | 18 |
mature T cell | 1.52e-08 | 18 |
immature alpha-beta T cell | 1.52e-08 | 18 |
CD8-positive, alpha-beta T cell | 1.91e-07 | 11 |