FFCP PHASE1:Hg19::chr2:136594740..136594760,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=3938 | |EntrezGene=3938 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=6530 | |HGNC=6530 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=P09848 | |UniProt=P09848 | ||
|association_with_transcript=0bp_to_ENST00000264162,NM_002299,uc002tuu.1_5end | |association_with_transcript=0bp_to_ENST00000264162,NM_002299,uc002tuu.1_5end | ||
|cluster_id=chr2:136594740..136594760,- | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_1_at_LCT_5end | |description=CAGE_peak_1_at_LCT_5end | ||
Latest revision as of 02:37, 17 September 2015
| Short description: | p1@LCT |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_LCT_5end |
| Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
| Association with transcript: | 0bp_to_ENST00000264162, NM_002299, uc002tuu.1_5end |
| EntrezGene: | LCT |
| HGNC: | 6530 |
| UniProt: | P09848 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@LCT |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell of prostate | 3.16e-07 | 3 |
Showing 1 to 1 of 1 entries
| Ontology term | p-value | n |
|---|---|---|
| intestine | 4.60e-36 | 17 |
| gastrointestinal system | 9.44e-34 | 25 |
| small intestine | 2.23e-33 | 4 |
| subdivision of digestive tract | 1.03e-11 | 118 |
| digestive system | 1.97e-09 | 145 |
| digestive tract | 1.97e-09 | 145 |
| primitive gut | 1.97e-09 | 145 |
| colon | 4.61e-09 | 9 |
| endoderm-derived structure | 1.73e-08 | 160 |
| endoderm | 1.73e-08 | 160 |
Showing 1 to 10 of 14 entries
