FFCP PHASE1:Hg19::chr9:33025086..33025145,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54840 | |EntrezGene=54840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15984 | |HGNC=15984 | ||
|TSSclassifier=strong | |||
|UniProt=Q6JV82 | |UniProt=Q6JV82 | ||
|association_with_transcript=0bp_to_ENST00000473270,ENST00000495360,uc003zrz.2_5end | |association_with_transcript=0bp_to_ENST00000473270,ENST00000495360,uc003zrz.2_5end | ||
|cluster_id=chr9:33025086..33025145,- | |||
|description=CAGE_peak_2_at_APTX_5end | |description=CAGE_peak_2_at_APTX_5end | ||
|id=chr9:33025086..33025145,- | |id=chr9:33025086..33025145,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!1.18e-15!173;UBERON:0006601!1.18e-15!173;UBERON:0004121!2.91e-14!169;UBERON:0000033!5.12e-14!123;UBERON:0002346!5.48e-14!90;UBERON:0000475!7.41e-14!365;UBERON:0000153!1.42e-13!129;UBERON:0007811!1.42e-13!129;UBERON:0003075!1.91e-12!86;UBERON:0007284!1.91e-12!86;UBERON:0000955!7.14e-12!69;UBERON:0006238!7.14e-12!69;UBERON:0002616!1.38e-11!59;UBERON:0003056!2.10e-11!61;UBERON:0001049!2.76e-11!57;UBERON:0005068!2.76e-11!57;UBERON:0006241!2.76e-11!57;UBERON:0007135!2.76e-11!57;UBERON:0000073!4.38e-10!94;UBERON:0001016!4.38e-10!94;UBERON:0000481!1.02e-09!347;UBERON:0005743!1.84e-09!86;UBERON:0002780!2.66e-09!41;UBERON:0001890!2.66e-09!41;UBERON:0006240!2.66e-09!41;UBERON:0007023!2.83e-09!115;UBERON:0001017!1.33e-08!82;UBERON:0003080!1.53e-08!42;UBERON:0000483!3.41e-08!309;UBERON:0000119!8.85e-08!312;UBERON:0001893!4.40e-07!34;UBERON:0002020!5.26e-07!34;UBERON:0003528!5.26e-07!34;UBERON:0002791!6.05e-07!33 | |ontology_enrichment_uberon=UBERON:0000924!1.18e-15!173;UBERON:0006601!1.18e-15!173;UBERON:0004121!2.91e-14!169;UBERON:0000033!5.12e-14!123;UBERON:0002346!5.48e-14!90;UBERON:0000475!7.41e-14!365;UBERON:0000153!1.42e-13!129;UBERON:0007811!1.42e-13!129;UBERON:0003075!1.91e-12!86;UBERON:0007284!1.91e-12!86;UBERON:0000955!7.14e-12!69;UBERON:0006238!7.14e-12!69;UBERON:0002616!1.38e-11!59;UBERON:0003056!2.10e-11!61;UBERON:0001049!2.76e-11!57;UBERON:0005068!2.76e-11!57;UBERON:0006241!2.76e-11!57;UBERON:0007135!2.76e-11!57;UBERON:0000073!4.38e-10!94;UBERON:0001016!4.38e-10!94;UBERON:0000481!1.02e-09!347;UBERON:0005743!1.84e-09!86;UBERON:0002780!2.66e-09!41;UBERON:0001890!2.66e-09!41;UBERON:0006240!2.66e-09!41;UBERON:0007023!2.83e-09!115;UBERON:0001017!1.33e-08!82;UBERON:0003080!1.53e-08!42;UBERON:0000483!3.41e-08!309;UBERON:0000119!8.85e-08!312;UBERON:0001893!4.40e-07!34;UBERON:0002020!5.26e-07!34;UBERON:0003528!5.26e-07!34;UBERON:0002791!6.05e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.43e-07;53!UBERON:0002616;2.43e-07;53!UBERON:0002780;5.05e-07;41!UBERON:0001890;5.05e-07;41!UBERON:0000955;7.75e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.87e-17,171;UBERON:0000924,9.87e-17,171;UBERON:0006601,9.87e-17,171;UBERON:0002346,4.06e-16,86;UBERON:0010371,7.91e-16,104;UBERON:0003075,1.80e-14,82;UBERON:0007284,1.80e-14,82;UBERON:0003056,1.12e-12,61;UBERON:0000955,1.42e-12,68;UBERON:0006238,1.42e-12,68;UBERON:0001049,4.73e-12,56;UBERON:0005068,4.73e-12,56;UBERON:0006241,4.73e-12,56;UBERON:0007135,4.73e-12,56;UBERON:0000073,1.66e-11,53;UBERON:0002616,1.66e-11,53;UBERON:0001016,9.89e-10,89;UBERON:0010314,1.50e-09,132;UBERON:0002780,2.66e-09,41;UBERON:0001890,2.66e-09,41;UBERON:0003080,2.66e-09,41;UBERON:0006240,2.66e-09,41;UBERON:0000483,3.37e-09,306;UBERON:0007023,3.60e-09,114;UBERON:0001017,4.08e-09,81;UBERON:0000119,9.46e-09,309;UBERON:0011216,1.47e-07,223;UBERON:0001893,4.40e-07,34;UBERON:0003528,5.25e-07,34;UBERON:0002020,5.25e-07,34 | |||
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| ||
|short_description=p2@APTX | |short_description=p2@APTX | ||
}} | }} |
Latest revision as of 02:54, 17 September 2015
Short description: | p2@APTX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_APTX_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000473270, ENST00000495360, uc003zrz.2_5end |
EntrezGene: | APTX |
HGNC: | 15984 |
UniProt: | Q6JV82 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 9.87e-17 | 171 |
ectoderm | 9.87e-17 | 171 |
presumptive ectoderm | 9.87e-17 | 171 |
neurectoderm | 4.06e-16 | 86 |
ecto-epithelium | 7.91e-16 | 104 |
neural plate | 1.80e-14 | 82 |
presumptive neural plate | 1.80e-14 | 82 |
pre-chordal neural plate | 1.12e-12 | 61 |
brain | 1.42e-12 | 68 |
future brain | 1.42e-12 | 68 |
neural tube | 4.73e-12 | 56 |
neural rod | 4.73e-12 | 56 |
future spinal cord | 4.73e-12 | 56 |
neural keel | 4.73e-12 | 56 |
regional part of nervous system | 1.66e-11 | 53 |
regional part of brain | 1.66e-11 | 53 |
nervous system | 9.89e-10 | 89 |
structure with developmental contribution from neural crest | 1.50e-09 | 132 |
regional part of forebrain | 2.66e-09 | 41 |
forebrain | 2.66e-09 | 41 |
anterior neural tube | 2.66e-09 | 41 |
future forebrain | 2.66e-09 | 41 |
epithelium | 3.37e-09 | 306 |
adult organism | 3.60e-09 | 114 |
central nervous system | 4.08e-09 | 81 |
cell layer | 9.46e-09 | 309 |
organ system subdivision | 1.47e-07 | 223 |
telencephalon | 4.40e-07 | 34 |
brain grey matter | 5.25e-07 | 34 |
gray matter | 5.25e-07 | 34 |