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FFCP PHASE1:Hg19::chr5:174151686..174151697,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=4488
|EntrezGene=4488
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=7392
|HGNC=7392
|TSSclassifier=strong
|UniProt=P35548
|UniProt=P35548
|association_with_transcript=23bp_to_BT009814_5end
|association_with_transcript=23bp_to_BT009814_5end
|cluster_id=chr5:174151686..174151697,+
|coexpression_cluster_id=C2819
|coexpression_cluster_id=C2819
|description=CAGE_peak_4_at_MSX2_5end
|description=CAGE_peak_4_at_MSX2_5end
|id=chr5:174151686..174151697,+
|id=chr5:174151686..174151697,+
|ontology_enrichment_celltype=CL:0000039;3.29e-15;7!CL:0000586;3.29e-15;7!CL:0000214;1.14e-09;3!CL:0000083;1.80e-07;4
|ontology_enrichment_celltype=CL:0000039!4.29e-12!7;CL:0000586!4.29e-12!7
|ontology_enrichment_development=
|ontology_enrichment_celltype_v019=CL:0000039;3.29e-15;7!CL:0000586;3.29e-15;7!CL:0000214;1.14e-09;3!CL:0000083;1.80e-07;4
|ontology_enrichment_disease=DOID:1799;7.62e-26;1!DOID:10165;7.62e-26;1!DOID:1798;7.62e-26;1!DOID:1793;1.80e-07;4!DOID:5409;1.80e-07;4
|ontology_enrichment_celltype_v019_2=CL:0000039,2.85e-15,7;CL:0000586,2.85e-15,7;CL:0000214,1.19e-09,3;CL:0000083,2.04e-07,4
|ontology_enrichment_uberon=UBERON:0001282;3.15e-26;1!UBERON:0009842;3.15e-26;1!UBERON:0003704;3.15e-26;1!UBERON:0001171;3.15e-26;1!UBERON:0001172;3.15e-26;1!UBERON:0006915;1.14e-09;3!UBERON:0007616;1.14e-09;3!UBERON:0002217;1.14e-09;3!UBERON:0002018;1.14e-09;3!UBERON:0001280;1.14e-09;3!UBERON:0004647;1.14e-09;3!UBERON:0002394;1.44e-07;4!UBERON:0003928;1.44e-07;4
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=DOID:3095!1.44e-08!22;DOID:2994!1.44e-08!22;DOID:0050687!2.17e-07!143;DOID:4929!2.46e-07!2
|ontology_enrichment_disease_v019=DOID:1799;7.62e-26;1!DOID:10165;7.62e-26;1!DOID:1798;7.62e-26;1!DOID:1793;1.80e-07;4!DOID:5409;1.80e-07;4
|ontology_enrichment_disease_v019_2=DOID:1799,1.26e-25,1;DOID:10165,1.26e-25,1;DOID:1798,1.26e-25,1;DOID:0050687,1.70e-08,143;DOID:5409,1.80e-07,4;DOID:1793,2.04e-07,4
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019=UBERON:0001282;3.15e-26;1!UBERON:0009842;3.15e-26;1!UBERON:0003704;3.15e-26;1!UBERON:0001171;3.15e-26;1!UBERON:0001172;3.15e-26;1!UBERON:0006915;1.14e-09;3!UBERON:0007616;1.14e-09;3!UBERON:0002217;1.14e-09;3!UBERON:0002018;1.14e-09;3!UBERON:0001280;1.14e-09;3!UBERON:0004647;1.14e-09;3!UBERON:0002394;1.44e-07;4!UBERON:0003928;1.44e-07;4
|ontology_enrichment_uberon_v019_2=UBERON:0001282,2.78e-26,1;UBERON:0009842,2.78e-26,1;UBERON:0003704,2.78e-26,1;UBERON:0001171,2.78e-26,1;UBERON:0001172,2.78e-26,1;UBERON:0001280,1.10e-09,3;UBERON:0004647,1.10e-09,3;UBERON:0005171,1.10e-09,3;UBERON:0006915,1.19e-09,3;UBERON:0007616,1.19e-09,3;UBERON:0002217,1.19e-09,3;UBERON:0002018,1.19e-09,3
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81600920916704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520855522170466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,2.73460934032803,4.38071418337314,1.97466817701499,0.54323685961004,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0.114536596165916,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,1.04762677792569,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0.527613733078862,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19370465096821,0.118920090777569,1.35535298446752,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,2.0510303085114,0.135982980381829,0,0,0,0,0,0,0.109265571963696,0.886889507080059,0.203977659483963,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0.179650404213174,0,0,0,0,0,0
|short_description=p4@MSX2
|short_description=p4@MSX2
}}
}}

Latest revision as of 03:07, 17 September 2015

Short description:p4@MSX2
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_4_at_MSX2_5end
Coexpression cluster:C2819_choriocarcinoma_small_synovial_pancreatic_teratocarcinoma_cholangiocellular_Wilms
Association with transcript: 23bp_to_BT009814_5end
EntrezGene:MSX2
HGNC: 7392
UniProt: P35548
Genome view:ZENBU


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CAGE Expression



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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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