FFCP PHASE1:Hg19::chr1:152487957..152487969,+: Difference between revisions
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|id=chr1:152487957..152487969,+
|short_description=p3@CRCT1
|description=CAGE_peak_3_at_CRCT1_5end
|association_with_transcript=97bp_to_CR457218_5end
|EntrezGene=5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54544 | |EntrezGene=54544 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29875 | |HGNC=29875 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UGL9 | |UniProt=Q9UGL9 | ||
|association_with_transcript=97bp_to_CR457218_5end | |||
|cluster_id=chr1:152487957..152487969,+ | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_3_at_CRCT1_5end | |||
|id=chr1:152487957..152487969,+ | |||
|ontology_enrichment_celltype=CL:0000575!4.04e-31!2;CL:0000068!3.63e-21!3;CL:0000069!3.63e-21!3;CL:0000307!3.63e-21!3;CL:0000377!3.63e-21!3;CL:0002368!4.24e-11!13;CL:0002076!6.55e-09!43;CL:0002202!1.09e-07!9;CL:0002632!1.09e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002231;2.19e-12;3!CL:0000307;2.89e-12;3!CL:0002621;2.89e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,2.31e-12,3;CL:0002621,2.59e-12,3;CL:0000068,2.89e-12,3;CL:0000069,2.89e-12,3;CL:0000307,2.89e-12,3;CL:0000377,2.89e-12,3;CL:0002076,8.32e-08,42 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.84e-34;1!UBERON:0008814;1.07e-17;2!UBERON:0010056;1.07e-17;2!CL:0000377;2.89e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002372!2.63e-16!1;UBERON:0001961!2.63e-16!1;UBERON:0001744!2.63e-16!1;UBERON:0001735!2.63e-16!1;UBERON:0000964!4.18e-16!4;UBERON:0004348!4.18e-16!4;UBERON:0005427!4.18e-16!4;UBERON:0003126!1.24e-09!7;UBERON:0001005!1.24e-09!7;UBERON:0000341!3.71e-09!2;UBERON:0001444!6.04e-08!48;UBERON:0001004!2.31e-07!72;UBERON:0000161!2.63e-07!35;UBERON:0000065!3.72e-07!53;UBERON:0000166!3.80e-07!21;UBERON:0001042!5.26e-07!10;UBERON:0009145!5.26e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;7.05e-18;2!UBERON:0001043;1.85e-12;3!UBERON:0001723;2.89e-12;3!UBERON:0001949;2.89e-12;3!UBERON:0001033;2.89e-12;3!UBERON:0000974;7.80e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,6.48e-18,2;UBERON:0001043,1.85e-12,3;UBERON:0009143,1.85e-12,3;UBERON:0001949,2.59e-12,3;UBERON:0001723,3.24e-12,3;UBERON:0001033,3.24e-12,3;UBERON:0010056,3.24e-12,3;UBERON:0000161,5.58e-09,36;UBERON:0000166,5.91e-07,22 | |||
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|short_description=p3@CRCT1 | |||
}} | }} |
Latest revision as of 03:34, 17 September 2015
Short description: | p3@CRCT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CRCT1_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 97bp_to_CR457218_5end |
EntrezGene: | CRCT1 |
HGNC: | 29875 |
UniProt: | Q9UGL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 2.31e-12 | 3 |
gingival epithelial cell | 2.59e-12 | 3 |
duct epithelial cell | 2.89e-12 | 3 |
branched duct epithelial cell | 2.89e-12 | 3 |
tracheal epithelial cell | 2.89e-12 | 3 |
tracheoblast | 2.89e-12 | 3 |
endo-epithelial cell | 8.32e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
throat | 6.48e-18 | 2 |
esophagus | 1.85e-12 | 3 |
esophageal region | 1.85e-12 | 3 |
gingival epithelium | 2.59e-12 | 3 |
tongue | 3.24e-12 | 3 |
gustatory system | 3.24e-12 | 3 |
future tongue | 3.24e-12 | 3 |
orifice | 5.58e-09 | 36 |
oral opening | 5.91e-07 | 22 |