FFCP PHASE1:Hg19::chr7:150497926..150497937,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55365 | |EntrezGene=55365 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24930 | |HGNC=24930 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=40bp_to_ENST00000475710_5end | |association_with_transcript=40bp_to_ENST00000475710_5end | ||
|cluster_id=chr7:150497926..150497937,+ | |||
|coexpression_cluster_id=C2565 | |coexpression_cluster_id=C2565 | ||
|description=CAGE_peak_7_at_TMEM176A_5end | |description=CAGE_peak_7_at_TMEM176A_5end | ||
|id=chr7:150497926..150497937,+ | |id=chr7:150497926..150497937,+ | ||
|ontology_enrichment_celltype=CL:0002194!8.31e-20!63;CL:0000576!8.31e-20!63;CL:0000040!8.31e-20!63;CL:0000559!8.31e-20!63;CL:0002009!7.06e-19!65;CL:0002057!1.41e-17!42;CL:0000839!8.55e-17!70;CL:0000557!2.05e-16!71;CL:0000860!7.08e-16!45;CL:0000766!8.85e-16!76;CL:0000763!1.34e-10!112;CL:0000049!1.34e-10!112;CL:0002087!5.34e-09!119;CL:0000738!1.10e-08!140;CL:0002031!4.78e-07!124 | |ontology_enrichment_celltype=CL:0002194!8.31e-20!63;CL:0000576!8.31e-20!63;CL:0000040!8.31e-20!63;CL:0000559!8.31e-20!63;CL:0002009!7.06e-19!65;CL:0002057!1.41e-17!42;CL:0000839!8.55e-17!70;CL:0000557!2.05e-16!71;CL:0000860!7.08e-16!45;CL:0000766!8.85e-16!76;CL:0000763!1.34e-10!112;CL:0000049!1.34e-10!112;CL:0002087!5.34e-09!119;CL:0000738!1.10e-08!140;CL:0002031!4.78e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000453;1.26e-08;5!CL:0000473;3.65e-08;39!CL:0000234;3.65e-08;39!CL:0000990;4.27e-08;8!CL:0000235;2.93e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.01e-09,48;CL:0000234,6.01e-09,48;CL:0000453,9.26e-09,5;CL:0000990,3.81e-08,8;CL:0002194,4.18e-08,59;CL:0000576,4.18e-08,59;CL:0000040,4.18e-08,59;CL:0000559,4.18e-08,59;CL:0002009,9.03e-08,61;CL:0000235,3.30e-07,6;CL:0000839,5.04e-07,66;CL:0000557,6.89e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!7.67e-16!115;UBERON:0000160!9.76e-15!27;UBERON:0002371!1.91e-13!80;UBERON:0000059!2.62e-13!11;UBERON:0002390!5.36e-13!102;UBERON:0003061!5.36e-13!102;UBERON:0005409!9.70e-13!35;UBERON:0002193!2.25e-12!112;UBERON:0001474!7.81e-12!86;UBERON:0001155!7.10e-11!9;UBERON:0007023!3.09e-10!115;UBERON:0004765!1.03e-08!101;UBERON:0001434!1.03e-08!101;UBERON:0004921!9.06e-08!129;UBERON:0004185!9.06e-08!129;UBERON:0000062!9.55e-08!511 | |ontology_enrichment_uberon=UBERON:0002405!7.67e-16!115;UBERON:0000160!9.76e-15!27;UBERON:0002371!1.91e-13!80;UBERON:0000059!2.62e-13!11;UBERON:0002390!5.36e-13!102;UBERON:0003061!5.36e-13!102;UBERON:0005409!9.70e-13!35;UBERON:0002193!2.25e-12!112;UBERON:0001474!7.81e-12!86;UBERON:0001155!7.10e-11!9;UBERON:0007023!3.09e-10!115;UBERON:0004765!1.03e-08!101;UBERON:0001434!1.03e-08!101;UBERON:0004921!9.06e-08!129;UBERON:0004185!9.06e-08!129;UBERON:0000062!9.55e-08!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;7.24e-16;17!UBERON:0005409;3.96e-12;22!UBERON:0001155;1.27e-08;9!UBERON:0004921;8.92e-08;33!UBERON:0000059;4.65e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.11e-16,17;UBERON:0005409,1.39e-10,25;UBERON:0001155,1.30e-08,9;UBERON:0000059,4.73e-07,11;UBERON:0003929,5.65e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0.895661896959697,0.647787332037959,0.77272670290256,1.01778767145695,0,0,1.16214518452842,0,0,0.575384784644301,0.256160706529101,0.236482229888585,0.689491361473237,0,0,1.31769637679823,0.272906150057846,0.224723484445085,0.612167784741805,0,0,1.31940520074686,0.199463657621632,0.426224750532694,1.45104619314292,0,0,0.502497330513487,0.521482918420201,0.217188844705117,1.21079900526674,0.368277635987565,0.316462387440884,0,1.91343869968539,0.419317291016752,0,2.4028302854641,0,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89919659471683,0,0,0.324547393654683,1.0447784237956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.478154526838,3.9313088667105,14.1789577603537,0,8.11723694384549,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,3.7440682422278,1.33768046059855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59265908448164,0,0,0.114814448164607,0,1.31124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.52199385028373,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,2.68550612170684,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39617372749944,0.823611089208164,0.353437207037059,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.49592225359776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.552567831062295,1.0077309914171,0,0.246169610922139,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,5.97157158647103,9.46495940185729,2.4441205797345,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,1.49417096317547,0,0,0,8.06496489951233,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0.429226048136571,0.446342914883745,0.470284307407084,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,7.48654219342383,2.8850023474249,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,24.3276707905617,9.27548222385549,0.129282956361551,0,0,0,0.213574825135389,0,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94860308839388,3.45448584814744,1.4720885483026,0,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0,0,0,0,0,0,0,9.79985527530241,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676892955143315,0,0.781514011233092,0,0,0.739280431085226,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0.913158720509496,0,0,0.857718530119876,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3987915634916,0,0,0,0,0.301925687133347,9.49242144727719,6.1196676941108,16.4611053726533,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0.0645889098360061,0.186224142887574,0,0.12729431655633,0,0.217716747896961,0,0.0673520530145875,0.645499848534087,0,0,0,0,0.179650404213174,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0.895661896959697,0.647787332037959,0.77272670290256,1.01778767145695,0,0,1.16214518452842,0,0,0.575384784644301,0.256160706529101,0.236482229888585,0.689491361473237,0,0,1.31769637679823,0.272906150057846,0.224723484445085,0.612167784741805,0,0,1.31940520074686,0.199463657621632,0.426224750532694,1.45104619314292,0,0,0.502497330513487,0.521482918420201,0.217188844705117,1.21079900526674,0.368277635987565,0.316462387440884,0,1.91343869968539,0.419317291016752,0,2.4028302854641,0,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89919659471683,0,0,0.324547393654683,1.0447784237956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.478154526838,3.9313088667105,14.1789577603537,0,8.11723694384549,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,3.7440682422278,1.33768046059855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59265908448164,0,0,0.114814448164607,0,1.31124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.52199385028373,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,2.68550612170684,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39617372749944,0.823611089208164,0.353437207037059,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.49592225359776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.552567831062295,1.0077309914171,0,0.246169610922139,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,5.97157158647103,9.46495940185729,2.4441205797345,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,1.49417096317547,0,0,0,8.06496489951233,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0.429226048136571,0.446342914883745,0.470284307407084,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,7.48654219342383,2.8850023474249,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,24.3276707905617,9.27548222385549,0.129282956361551,0,0,0,0.213574825135389,0,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94860308839388,3.45448584814744,1.4720885483026,0,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0,0,0,0,0,0,0,9.79985527530241,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.676892955143315,0,0.781514011233092,0,0,0.739280431085226,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0.913158720509496,0,0,0.857718530119876,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3987915634916,0,0,0,0,0.301925687133347,9.49242144727719,6.1196676941108,16.4611053726533,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0.0645889098360061,0.186224142887574,0,0.12729431655633,0,0.217716747896961,0,0.0673520530145875,0.645499848534087,0,0,0,0,0.179650404213174,0,0,0,0,0.402547587182052,0 | ||
|short_description=p7@TMEM176A | |short_description=p7@TMEM176A | ||
}} | }} |
Latest revision as of 04:03, 17 September 2015
Short description: | p7@TMEM176A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TMEM176A_5end |
Coexpression cluster: | C2565_Hepatocyte_liver_normal_gastrointestinal_kidney_smallcell_CD14 |
Association with transcript: | 40bp_to_ENST00000475710_5end |
EntrezGene: | TMEM176A |
HGNC: | 24930 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.01e-09 | 48 |
phagocyte | 6.01e-09 | 48 |
Langerhans cell | 9.26e-09 | 5 |
conventional dendritic cell | 3.81e-08 | 8 |
monopoietic cell | 4.18e-08 | 59 |
monocyte | 4.18e-08 | 59 |
monoblast | 4.18e-08 | 59 |
promonocyte | 4.18e-08 | 59 |
macrophage dendritic cell progenitor | 9.03e-08 | 61 |
macrophage | 3.30e-07 | 6 |
myeloid lineage restricted progenitor cell | 5.04e-07 | 66 |
granulocyte monocyte progenitor cell | 6.89e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.11e-16 | 17 |
gastrointestinal system | 1.39e-10 | 25 |
colon | 1.30e-08 | 9 |
large intestine | 4.73e-07 | 11 |
gut epithelium | 5.65e-07 | 54 |