FFCP PHASE1:Hg19::chr6:21666284..21666297,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=401237 | |EntrezGene=401237 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=28245 | |HGNC=28245 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-377bp_to_NR_015410,uc003ndj.2,uc011djj.1_5end | |association_with_transcript=-377bp_to_NR_015410,uc003ndj.2,uc011djj.1_5end | ||
|cluster_id=chr6:21666284..21666297,+ | |||
|description=CAGE_peak_26_at_LINC00340_5end | |description=CAGE_peak_26_at_LINC00340_5end | ||
|id=chr6:21666284..21666297,+ | |id=chr6:21666284..21666297,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.36e-12!6;CL:0000031!1.36e-12!6;CL:0000404!1.36e-12!6;CL:0000039!1.04e-10!7;CL:0000586!1.04e-10!7;CL:1001319!7.98e-10!1;CL:1000600!7.98e-10!1;CL:0002591!8.68e-10!1;CL:0000047!1.42e-09!8 | |ontology_enrichment_celltype=CL:0000540!1.36e-12!6;CL:0000031!1.36e-12!6;CL:0000404!1.36e-12!6;CL:0000039!1.04e-10!7;CL:0000586!1.04e-10!7;CL:1001319!7.98e-10!1;CL:1000600!7.98e-10!1;CL:0002591!8.68e-10!1;CL:0000047!1.42e-09!8 | ||
|ontology_enrichment_celltype_v019=CL:1001319;1.55e-98;1!CL:1000600;1.55e-98;1!CL:0002591;1.55e-98;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,9.37e-99,1;CL:1000600,9.37e-99,1;CL:0002591,2.55e-98,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5409!6.47e-09!4 | |ontology_enrichment_disease=DOID:5409!6.47e-09!4 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004645!7.98e-10!1;UBERON:0001256!7.98e-10!1;UBERON:0001259!7.98e-10!1;UBERON:0000996!1.12e-09!1;UBERON:0000473!1.96e-09!8;UBERON:0003135!5.45e-07!11 | |ontology_enrichment_uberon=UBERON:0004645!7.98e-10!1;UBERON:0001256!7.98e-10!1;UBERON:0001259!7.98e-10!1;UBERON:0000996!1.12e-09!1;UBERON:0000473!1.96e-09!8;UBERON:0003135!5.45e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.55e-98;1!UBERON:0001256;1.55e-98;1!UBERON:0001259;1.55e-98;1!UBERON:0001255;3.52e-50;2!UBERON:0000078;3.52e-50;2!UBERON:0002012;3.52e-50;2!UBERON:0001556;3.52e-50;2!UBERON:0008886;3.52e-50;2!UBERON:0000365;4.66e-21;5!UBERON:0005910;8.34e-18;6!UBERON:0000077;6.71e-16;27!UBERON:0003350;1.00e-13;8!UBERON:0005911;1.77e-12;36!UBERON:0010313;2.87e-11;10!UBERON:0000486;1.27e-09;12!UBERON:0002075;7.39e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,9.37e-99,1;UBERON:0001256,9.37e-99,1;UBERON:0001259,9.37e-99,1;UBERON:0001255,2.74e-50,2;UBERON:0001556,2.74e-50,2;UBERON:0000078,4.52e-50,2;UBERON:0007497,4.52e-50,2;UBERON:0003643,4.52e-50,2;UBERON:0003504,4.52e-50,2;UBERON:0003469,4.52e-50,2;UBERON:0003496,4.52e-50,2;UBERON:0002012,4.52e-50,2;UBERON:0008886,4.52e-50,2;UBERON:0007303,4.52e-50,2;UBERON:0002061,4.52e-50,2;UBERON:0005432,4.52e-50,2;UBERON:0004363,4.52e-50,2;UBERON:0004145,5.96e-34,3;UBERON:0000365,4.21e-21,5;UBERON:0003498,5.15e-21,5;UBERON:0005985,5.15e-21,5;UBERON:0005910,7.67e-18,6;UBERON:0010188,9.07e-18,6;UBERON:0002539,9.07e-18,6;UBERON:0003351,9.07e-18,6;UBERON:0008816,9.07e-18,6;UBERON:0000077,6.74e-15,29;UBERON:0003350,9.39e-14,8;UBERON:0000485,2.45e-12,9;UBERON:0010313,3.02e-11,10;UBERON:0002342,3.02e-11,10;UBERON:0001042,3.02e-11,10;UBERON:0009145,3.02e-11,10;UBERON:0005062,3.02e-11,10;UBERON:0006562,2.37e-10,11;UBERON:0009722,2.37e-10,11;UBERON:0007690,2.37e-10,11;UBERON:0000162,1.86e-08,14;UBERON:0001353,1.86e-08,14;UBERON:0000163,1.86e-08,14;UBERON:0006866,1.86e-08,14;UBERON:0000164,1.86e-08,14;UBERON:0000931,1.86e-08,14;UBERON:0004122,5.55e-08,15;UBERON:0003103,4.47e-07,68;UBERON:0002075,7.18e-07,18;UBERON:0008814,7.60e-07,18 | |||
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|short_description=p26@LINC00340 | |short_description=p26@LINC00340 | ||
}} | }} |
Latest revision as of 04:04, 17 September 2015
Short description: | p26@LINC00340 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_LINC00340_5end |
Coexpression cluster: | NA |
Association with transcript: | -377bp_to_NR_015410, uc003ndj.2, uc011djj.1_5end |
EntrezGene: | LINC00340 |
HGNC: | 28245 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 9.37e-99 | 1 |
lower urinary tract cell | 9.37e-99 | 1 |
smooth muscle cell of the pulmonary artery | 2.55e-98 | 1 |