FFCP PHASE1:Hg19::chr12:125052112..125052172,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9612 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7673 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000542565_5end | |||
|cluster_id=chr12:125052112..125052172,- | |||
|description=CAGE_peak_2_at_NCOR2_5end | |||
|id=chr12:125052112..125052172,- | |||
|ontology_enrichment_celltype=CL:0002194!2.30e-07!63;CL:0000576!2.30e-07!63;CL:0000040!2.30e-07!63;CL:0000559!2.30e-07!63;CL:0000557!5.07e-07!71;CL:0002009!9.27e-07!65 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.39e-07,59;CL:0000576,4.39e-07,59;CL:0000040,4.39e-07,59;CL:0000559,4.39e-07,59;CL:0000557,9.81e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000922!4.40e-13!612;UBERON:0007023!1.35e-11!115;UBERON:0002050!2.41e-11!605;UBERON:0005423!2.41e-11!605;UBERON:0000923!4.83e-11!604;UBERON:0005291!4.83e-11!604;UBERON:0006598!4.83e-11!604;UBERON:0002532!4.83e-11!604;UBERON:0000468!1.86e-10!659;UBERON:0002346!1.06e-09!90;UBERON:0000480!1.29e-09!626;UBERON:0000467!1.40e-09!625;UBERON:0003075!1.70e-09!86;UBERON:0007284!1.70e-09!86;UBERON:0000073!3.14e-09!94;UBERON:0001016!3.14e-09!94;UBERON:0001049!8.27e-09!57;UBERON:0005068!8.27e-09!57;UBERON:0006241!8.27e-09!57;UBERON:0007135!8.27e-09!57;UBERON:0005743!8.88e-09!86;UBERON:0000062!9.17e-09!511;UBERON:0001017!9.98e-09!82;UBERON:0000955!5.89e-08!69;UBERON:0006238!5.89e-08!69;UBERON:0002616!9.61e-08!59;UBERON:0000924!3.57e-07!173;UBERON:0006601!3.57e-07!173;UBERON:0003076!5.18e-07!15;UBERON:0003057!5.18e-07!15;UBERON:0004121!6.14e-07!169;UBERON:0000025!8.86e-07!194 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,4.14e-12,592;UBERON:0007023,2.63e-11,114;UBERON:0000923,1.88e-10,560;UBERON:0010316,1.88e-10,560;UBERON:0005291,1.88e-10,560;UBERON:0006598,1.88e-10,560;UBERON:0010317,1.88e-10,560;UBERON:0002532,1.88e-10,560;UBERON:0002050,5.13e-10,564;UBERON:0002346,7.25e-10,86;UBERON:0005423,7.64e-10,581;UBERON:0003075,1.15e-09,82;UBERON:0007284,1.15e-09,82;UBERON:0001016,9.27e-09,89;UBERON:0001049,2.43e-08,56;UBERON:0005068,2.43e-08,56;UBERON:0006241,2.43e-08,56;UBERON:0007135,2.43e-08,56;UBERON:0001017,2.58e-08,81;UBERON:0000955,1.54e-07,68;UBERON:0006238,1.54e-07,68;UBERON:0000073,2.46e-07,53;UBERON:0002616,2.46e-07,53;UBERON:0010371,2.65e-07,104;UBERON:0003076,5.18e-07,15;UBERON:0003057,5.18e-07,15;UBERON:0004121,7.77e-07,171;UBERON:0000924,7.77e-07,171;UBERON:0006601,7.77e-07,171 | |||
|phase1_expression=3.81524596468169,7.27941781229343,4.79244973926302,6.00439790118782,5.81049422755474,6.10636966870258,10.1319951267324,3.79031924056099,14.626395179191,9.82935746006035,14.653824527421,8.08233076881637,8.70431028153897,3.09415882400117,4.97096063591874,2.6893005858071,1.80808358407193,2.19093027116212,5.85519358548608,11.3271373430645,22.2360753456236,15.9861907953825,7.15589967827642,14.0980657825071,16.571628426514,11.3855974564447,10.8372778073928,9.13045063238679,7.47392126012918,6.90892916574983,21.3646250176185,7.35536979583142,6.92773613189975,7.02532619316897,2.63388481973026,3.2698923472107,6.16560922603179,15.5118714388926,24.6669670388274,28.2114131930607,13.6588439286354,14.5752149708541,22.6666499518084,12.7950450126017,13.6035339727971,17.4660524055228,11.8538808821899,10.6903650885675,14.865905802965,10.3569261235974,8.96562472851852,5.67557351732605,10.6871161028352,17.4280864567633,16.251178391321,15.4358718424936,11.1891521523717,8.31476892446813,19.5893691117378,12.5162320559677,18.5407766481722,8.2462825046679,8.17800996248691,10.6556187633174,11.8985787837719,11.9150897185139,10.5879782329248,10.3011952755265,7.30076085788282,6.08128765174327,5.44859552370032,7.73383035573886,11.3926459478718,6.12640330304631,5.52771179909113,7.12839394728478,7.52601828681517,7.80919842775833,8.03627933485401,7.98035682475496,5.17183360717634,7.12390199682072,3.51992488922645,3.82297027883492,3.55803701545422,3.84057200309856,2.80277190925209,4.02326707968138,5.94940385506376,2.86216126360609,9.10740750575117,4.69789751496751,6.11637165000366,3.96513985737078,3.36305137788922,4.21414535640123,6.09800287352883,7.46720449223413,6.37364646898479,1.00311897234407,2.60737813306872,1.89379122293893,1.94826728407911,1.22551502573691,1.47302953737419,1.32920336750173,2.16643091012012,3.5865569523189,2.73124629875744,2.79544437826249,0.552700035571697,1.15921234294021,4.15202376853769,3.74557159325598,4.18142095219907,1.24640276967323,0.766440987203842,3.09264700934367,1.77113784413652,3.18565414324097,2.60433381542567,0.950452044448374,1.80690142893327,1.27986611154418,2.49861453104692,4.2619905367923,0.821127996921047,5.84659555351724,5.88368430723716,6.95157138637435,17.0664806419773,6.70700859703636,7.41602858692476,5.42158728576849,4.51204119572301,9.12533069453189,3.1811437882044,12.6525066278685,9.64255135073492,11.0864698731282,18.093965852784,9.62696204908188,13.8432209551166,7.04490441290416,20.7710331938997,14.8010276704377,20.3425679593864,11.4475499666564,9.15191857248205,2.22874500797739,8.54678351676832,4.30117297553062,9.02565304179745,11.3061588384802,13.0044825225071,10.1793675517825,14.4206526910399,5.16833518338658,7.1153252537342,3.68192674041137,4.02829317109147,12.9246257972147,11.2268546472158,4.04429388380456,12.9622711661082,6.25098097988558,9.43023365029913,9.68458732156571,19.9311628705648,18.0360475317944,15.9385517219454,10.5424333948851,7.75560528296651,5.66922267785295,10.4364109856017,3.92554586160197,5.82600395578163,2.58152958673932,8.51204117276057,11.2135520028461,5.33744978648525,11.5933747756065,11.2035972743916,7.27437629176316,5.23078089963068,9.68687536927561,17.86145365888,12.4190358871912,1.5608003841516,3.99330275081114,5.97794722207204,3.64046945795671,2.75184005425824,2.94946694074722,2.44985005505872,4.79053837515895,10.6425554611038,10.6920257155385,11.8688126053707,3.64064544775211,13.6537446945085,2.52504170931099,8.50805935129356,3.60183350129438,4.38977620880838,6.12975591598039,15.9252342440993,4.76415169272088,5.91985797773244,11.3185416073841,4.23863802319124,5.10154863343484,2.88547081867629,8.50213782150576,6.32797311527405,9.11392194102838,3.60516919096435,5.55354303337052,4.97069452668416,3.71785930683267,1.42003837006646,1.61203357164224,3.73033303083073,4.63826047591912,6.54590689418003,8.60413786167011,16.7103977397546,11.5300898439692,11.1546185154738,13.164953986952,9.84051318414951,5.10968302706162,10.9514672630871,6.43240938192885,15.1948413487729,6.03678306441573,5.0531563716871,3.66751080123516,4.21461725195254,4.09718750801919,2.64705534557745,3.05031221729369,2.37270619111097,2.83145747136345,1.76599318612811,4.23221872641029,5.16708818237254,22.4386838085513,16.8745344645874,22.0513067078313,2.53510069643662,6.87979051674338,5.31710916013264,9.71218818712231,7.01034099695747,3.25978839567199,7.46301940778654,5.62008766288098,6.43385423434437,5.64789515467031,16.2904152655162,9.35941306751621,4.3299402607582,8.34698915820553,7.16193034838512,3.03169540298255,1.85194205030644,2.47330397904978,8.69224837755203,6.00940313466411,8.12516120088411,5.14809383306323,12.6336487945419,3.74935335947108,3.69560682037491,2.1266264586358,3.04498977189684,4.06887513919547,14.9519244874432,0.492663237895943,3.25779205848936,13.8909837412317,13.8355155280283,16.9164860791349,3.4923841860693,6.875791660049,9.37739577680376,11.9750712215894,8.3290269089692,6.00686115687835,1.14330573052231,4.59737445815979,10.0270815831654,3.44689943358465,5.42941206182667,25.0359512096318,1.690605505112,10.1056484302251,5.2003718455683,4.8869401109807,9.92943924162948,4.79559922228979,5.86209773998405,23.3327290318321,8.23240336780769,2.28015329005615,6.75244702610837,4.75171123760058,4.22015127883421,2.61460037580088,9.09754219756719,9.72990245129524,8.03611346291402,10.5416969741516,5.03212196532324,6.89171615004683,2.85273810081437,2.75084482668401,4.72595541865882,8.0577433457953,7.17344921558575,5.12279976525011,7.76259269494262,7.57223914050515,6.60646022978405,6.50699269288109,13.1459098172208,8.20829700138309,19.1381625495949,3.74503511973591,2.99161459204025,3.31532410748828,6.74803204455269,9.50323990013386,2.44138521329762,11.4383973841944,6.95873056308931,7.09660867652706,8.9027475394462,10.5331134904702,2.27407504055985,11.3820378421755,1.32845119707087,9.03408925854345,4.69171518127647,14.4892856522428,18.5297448857862,9.51132920165282,16.1785650613963,17.6100470375683,5.15316871458641,4.99306318531491,12.0956117331872,2.97729369382532,6.1384789315225,5.61320188866147,6.40695746278505,8.18731598506726,12.5466058492014,7.42090332224955,3.39261326365842,9.94345661753512,3.28508624055237,6.75030757938707,4.06736324609857,12.5693827575287,4.81215528727884,12.5230144952819,4.13332013392584,4.73437036817464,11.6700729313887,12.6335891614075,2.92658280996776,14.1182958451834,4.38417673959782,4.64427167128653,7.96133688496276,9.52524749548488,6.47747748306418,13.880452742126,13.8182683147365,23.5794193711781,6.88165937221603,7.47968408035852,7.61174166055406,1.09629938322967,2.0914836081992,7.43705362837529,16.728746930685,2.60302715731442,9.68585509488589,7.6002655799225,7.83840249245586,9.76251414593493,9.75090369054782,3.21367859688319,10.6337790121334,2.7728751080636,5.06562126596228,4.13509717453592,7.08973616130606,8.84601832876794,9.2044757609389,14.5122218104182,1.81813406897076,6.72665235777872,10.4642424245559,8.59841137272174,4.18360994367557,3.77774816196768,11.1525963225696,9.24100740528266,7.45228442443831,6.95946393660058,4.44778125849408,1.14499909393593,4.46590043231601,4.11293252134344,13.9160041564392,11.0036050263874,5.56320684444097,13.6827396608153,7.8494864019923,3.95719406683292,8.23611089208164,9.77842939469197,5.0545620393329,9.5106192703805,5.89761838734574,11.2155759990606,4.14312932373184,4.22600587027022,5.7329962791354,6.50464986987079,20.3414609916437,12.1300375580147,7.29782872765342,9.20746859032902,8.10285747973363,4.59126326432643,7.50768394762005,9.914351939192,7.60578126837052,4.01551786171344,6.9756819119316,8.20343418406876,2.83808851256478,7.38876723541824,5.59801318031833,8.72788299661145,19.946279053964,6.06199310170726,10.0545341330368,2.17781969722645,7.71979166369589,7.31859133541091,5.05414427002877,7.53831261012349,4.82419140434615,2.53723804616085,3.82318603571188,8.54470780761244,5.00286728461357,6.9931586424653,1.29694662238543,3.24018862342869,10.3106272918255,12.0711200374045,83.7357474079122,13.7222520949378,6.87471747965159,5.19369166715201,7.18532617818983,5.42049327277996,9.18065108590956,4.21311814291207,10.3720055534703,1.94773164164733,6.73913227472301,22.1387638662196,6.58055562246698,12.5317238545034,4.9094615562465,4.17528995269619,6.45759063011352,7.23938604073555,6.18309620560377,8.29550063632837,6.03925491309523,5.67287081820489,5.27547857585509,5.01131113011436,11.0778659052941,5.40911356951966,2.33150377598474,7.04935025439248,19.4626162024549,8.05794985995417,6.91754973972227,4.1234052182667,8.52408440419239,3.10367830158997,4.75143489332222,2.76444631889309,3.97659059106519,15.3329663887459,7.23506582648888,9.06421308247178,34.2023161167349,24.5075025548816,9.66993704359017,5.03865495708552,3.1703291575668,7.63125793858631,5.59871257791253,3.6846023970404,12.5314822272926,8.18515792362995,11.4426350538843,19.1586473877552,2.22273980289274,24.2333186523805,7.51421595110995,11.9768278800717,8.07326059364223,3.41093999985163,36.2499787717397,26.8552537953779,11.6956679134672,8.27356886187777,8.61858433103662,10.4977660817972,2.08349993919951,7.97167247232455,12.3008367397916,12.2065389053667,29.8564001814306,29.5547618953547,3.72955175161753,6.75418473817739,7.11061095820877,12.6198423946227,7.29229157420808,18.9062401598209,10.4118867515336,7.27937391877454,3.82801391678303,8.79336896657878,1.5991043280559,4.08773192782946,9.88975615288656,9.30785418640876,3.83512623049207,4.90156335794349,3.5242533264927,3.7950746544837,2.54298526368606,1.68798451622422,3.7543545876604,6.36088821452734,5.84249327303646,20.9005005526486,12.6494317239775,23.8301756524114,7.41302821701555,4.81899361891361,3.65476823269094,20.9617523569906,12.0386647094818,9.37057782901357,5.47364367646998,5.6742739490306,10.9251170790342,16.177960516825,19.3585145677862,2.75465485467441,23.8845270995684,2.25485129121739,3.31802212471191,11.9637697087293,8.93678280863847,8.79012171540231,15.5314158704846,7.9690672888342,3.05084280628905,5.0332324117188,6.07552863969141,5.48473001456536,9.95942008979572,3.0957485844891,6.86969952152505,11.4750227825311,8.12943024826771,11.4447039456335,4.85408696803251,15.8186518546373,9.72997664991931,7.35244063301062,7.59729551470544,8.21315807486173,3.52698809106748,16.6493335896695,14.1864822803312,13.2563183781778,3.09248809647972,3.08870996151536,9.79572626319418,13.6677789121976,8.01359717697104,5.16435983079733,4.39331954511799,3.97793048781655,19.6486401133033,8.40588404193705,28.3394134306426,25.5493176133945,9.88460515265901,6.57218385698286,13.9641200636127,17.6453526488996,7.89660327034495,14.3768880359274,21.8905284549651,14.059801818838,9.74160351057531,13.3310956910689,10.4846354574708,4.96334048535509,4.86253564448882,4.51603743823039,10.3348855590486,8.21331321038109,7.15706720828373,21.6563415717405,7.5553979778559,8.38990563243126,3.73896304226267,4.04953004792701,5.41661368190565,9.17318305536172,22.1386893815516,4.01909107225911,13.4283745625595,5.80801850856736,15.4187111826247,7.67660789277781,10.0057345692271,11.9176554665778,11.187815656809,5.42999601753713,1.72844298240254,3.5924609612035,3.59190574687462,5.25392132795769,6.98590889320229,13.0308905248145,7.4741639175822,6.62534444561107,13.4454274616013,22.7440074997427,3.07956308191793,5.63852017853338,16.7656237731281,7.70301094988363,41.0096664793724,19.3504748506661,7.70685364401983,3.89736314818867,4.46838880439127,15.2324984943453,10.7796654429761,8.27133057261346,6.22957998348628,12.093165411268,6.2024772597689,5.97928698019619,14.271766100541,5.73409195690071,16.9721448851384,16.7660287941735,14.6649553032405,10.6233346767791,3.7912279385412,2.85465333544967,10.5869618864177,5.62001886968258,7.24605143054126,4.47764408660622,4.20683957725004,3.32883516901568,1.89403005275089,4.27665432979378,4.44905610798268,3.8902811627477,5.29308233171337,6.68379962505956,4.28779934969938,4.61960624774737,3.59842489730884,7.60788488693671,2.07353103920428,4.78515086204391,7.30443086536427,5.10875870590543,4.95046775819434,1.22061219961398,2.72772988803839,8.27061289227161,7.88857391793439,7.16572599657509,6.0004164699473,3.43395705182793,5.38799182025471,5.04739592914604,6.74169406425562,6.86213092399762,7.82982875895635,9.97506072253998,3.70435958918134,7.58683783970049,3.40268798054826,8.33763907334625,5.48210123946768,6.36080925405172,5.40159307158561,5.23721566024525,5.63731340893483,3.45430341731199,2.12701969324168,15.6232032851456,3.89720617678777,8.6362146203686,7.52400813576883,8.19024622116032,5.89854981008926,22.6103971993731,4.79969750051832,2.24052632357696,17.2214979660816,3.97261167496785,9.20529751259204,9.23204750948334,8.08700438042865,19.5678388094587,11.6450796308416,5.18977608124458,17.9103806634903,11.8812770967818,6.80239744325385,15.1201632395983,13.4074780313579,9.22212616894914,3.78536376006016,3.20228299314188,6.70084293012299,3.062454773532,9.18477918879371,0,17.8789922144009,15.7939600465381,11.595298026199,11.6875756664528,9.36558744664736,15.704636228507,6.28145398406564,8.96569897442827,4.03542916747694,9.47310462432773,8.39040610027768,8.28431911272121,10.5425597721626,13.9139107446126,8.26990781684432,10.9411961572633,18.0715619192181,4.9131575253029,12.8634795008829,8.91496116962809,3.90539049306924,13.434641772577,10.1465296310251,14.2213450344737,8.77212426971492,10.9166459245645,6.33136479694634,12.009668198122,2.14280734351315,4.03540466662589,3.03482802118316,12.7490827156727,4.43511850813194,9.56442096712968,9.60332852849544,14.8174017889493,10.6551893171816,3.90039674917095,3.55940486054621,11.303005370474,10.0553977546241,17.0966019621411,31.0473964973229,2.37520350340484,5.7330202546446,14.7241681003912,18.487592572729,23.0158022228888,21.5584257655198,8.81882501203278,7.8742142381954,11.6088564423886,20.7377898544228,3.01159151174194,3.78662402337809,3.15289597608883,17.3588690578281,6.4149923192334,2.79185747097888,2.8666168169323,12.8633746567461,12.5632299027511,9.14384437367021,8.41657488344263,11.0875831404747,30.1551752147932,16.0284627709516,5.84848658655264,5.76957247967968,5.94600453887843,5.647304101948,12.8630404592152,7.85006786546702,10.8043821351123,9.61662066217412,3.76253837089218,20.1021623838203,5.89191367754065,15.7046773691956,12.7729952140647,21.9780978343368,12.4046793722106,7.61269735636814,11.731335611191,6.19635166734559,3.03541695629618,5.64631794745107,8.3451021356735,25.5617735886281,11.4682320851135,23.9377103862924,5.99531936334102,12.3064597245556,11.3451179488498,9.52248312927721,8.92788043600203,5.0839319149456,0.865253124247578,17.7894659017461,14.8601177870626,18.1178856446355,18.2560005238147,13.0936528580125,21.5953013906886,7.77193371806363,10.6847964487718,4.82335434281121,8.29169439458779,28.2372078702974,12.7940389140589,11.903221573187,12.3364817786772,11.8562704305089,7.73709851806233,7.51036467682346,14.5524376049918,9.5795369074663,13.6893320434112,7.5434299376338,12.192774916755,16.6330178273007,10.4196183822047,5.12291260213034,9.653614114347,33.6844507899701,4.69281884806909,5.50086498822899,15.8689509543138,16.6439193546378,9.25859450518721,8.01421230758082 | |||
|short_description=p2@NCOR2 | |||
}} |
Latest revision as of 04:10, 17 September 2015
Short description: | p2@NCOR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NCOR2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000542565_5end |
EntrezGene: | NCOR2 |
HGNC: | 7673 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 4.39e-07 | 59 |
monocyte | 4.39e-07 | 59 |
monoblast | 4.39e-07 | 59 |
promonocyte | 4.39e-07 | 59 |
granulocyte monocyte progenitor cell | 9.81e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
embryo | 4.14e-12 | 592 |
adult organism | 2.63e-11 | 114 |
germ layer | 1.88e-10 | 560 |
germ layer / neural crest | 1.88e-10 | 560 |
embryonic tissue | 1.88e-10 | 560 |
presumptive structure | 1.88e-10 | 560 |
germ layer / neural crest derived structure | 1.88e-10 | 560 |
epiblast (generic) | 1.88e-10 | 560 |
embryonic structure | 5.13e-10 | 564 |
neurectoderm | 7.25e-10 | 86 |
developing anatomical structure | 7.64e-10 | 581 |
neural plate | 1.15e-09 | 82 |
presumptive neural plate | 1.15e-09 | 82 |
nervous system | 9.27e-09 | 89 |
neural tube | 2.43e-08 | 56 |
neural rod | 2.43e-08 | 56 |
future spinal cord | 2.43e-08 | 56 |
neural keel | 2.43e-08 | 56 |
central nervous system | 2.58e-08 | 81 |
brain | 1.54e-07 | 68 |
future brain | 1.54e-07 | 68 |
regional part of nervous system | 2.46e-07 | 53 |
regional part of brain | 2.46e-07 | 53 |
ecto-epithelium | 2.65e-07 | 104 |
posterior neural tube | 5.18e-07 | 15 |
chordal neural plate | 5.18e-07 | 15 |
ectoderm-derived structure | 7.77e-07 | 171 |
ectoderm | 7.77e-07 | 171 |
presumptive ectoderm | 7.77e-07 | 171 |