FFCP PHASE2:Hg19::chr9:34381511..34381522,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:84688 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:19919 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=84688 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=19919 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q5T5A0 | ||
|association_with_transcript=6bp_to_ENST00000379124_5end | |association_with_transcript=6bp_to_ENST00000379124_5end | ||
|cluster_id=chr9:34381511..34381522,- | |cluster_id=chr9:34381511..34381522,- | ||
Latest revision as of 05:13, 17 September 2015
| Short description: | p8@C9orf24 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_8_at_C9orf24_5end |
| Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
| Association with transcript: | 6bp_to_ENST00000379124_5end |
| EntrezGene: | C9orf24 |
| HGNC: | 19919 |
| UniProt: | Q5T5A0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p8@C9orf24 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| medulla oblongata | 2.30e-30 | 3 |
| myelencephalon | 2.30e-30 | 3 |
| future myelencephalon | 2.30e-30 | 3 |
| putamen | 2.10e-23 | 1 |
| epididymis | 6.40e-23 | 1 |
| brainstem | 9.74e-16 | 6 |
| open tracheal system trachea | 1.48e-12 | 2 |
| dorsal plus ventral thalamus | 1.85e-12 | 2 |
| thalamic complex | 1.85e-12 | 2 |
| regional part of nervous system | 2.08e-10 | 53 |
Showing 1 to 10 of 37 entries
