FFCP PHASE1:Hg19::chr10:135139771..135139785,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50632 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17938 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=32bp_to_ENST00000467611_5end | |||
|cluster_id=chr10:135139771..135139785,- | |||
|coexpression_cluster_id=C2993 | |||
|description=CAGE_peak_2_at_CALY_5end | |||
|id=chr10:135139771..135139785,- | |||
|ontology_enrichment_celltype=CL:0002322!1.12e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002321;4.17e-13;15!CL:0000333;2.80e-11;5!CL:0002322;2.38e-10;5!CL:0002553;3.26e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.90e-10,5;CL:0000333,2.90e-07,41;CL:0002553,3.57e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.21e-08;3!UBERON:0006238;1.47e-08;10!UBERON:0003056;1.48e-08;3!UBERON:0005425;9.50e-07;1 | |||
|ontology_enrichment_disease=DOID:3095!2.04e-08!22;DOID:2994!2.04e-08!22;DOID:171!5.71e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.56e-14;10!DOID:3095;6.36e-12;22!DOID:2994;6.36e-12;22!DOID:169;1.79e-09;6!DOID:178;9.50e-07;1!DOID:326;9.50e-07;1!DOID:3978;9.50e-07;1!DOID:3394;9.50e-07;1!DOID:5844;9.50e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.60e-14,10;DOID:3095,7.56e-12,22;DOID:2994,7.56e-12,22;DOID:169,1.74e-09,6;DOID:178,7.15e-07,1;DOID:326,7.15e-07,1;DOID:3978,7.15e-07,1;DOID:3394,7.15e-07,1;DOID:5844,7.15e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.21e-27!94;UBERON:0001016!4.21e-27!94;UBERON:0005743!3.40e-25!86;UBERON:0001017!3.61e-23!82;UBERON:0002346!2.97e-22!90;UBERON:0001049!1.09e-21!57;UBERON:0005068!1.09e-21!57;UBERON:0006241!1.09e-21!57;UBERON:0007135!1.09e-21!57;UBERON:0003075!5.21e-20!86;UBERON:0007284!5.21e-20!86;UBERON:0000955!7.71e-20!69;UBERON:0006238!7.71e-20!69;UBERON:0002616!4.85e-19!59;UBERON:0003056!1.46e-14!61;UBERON:0000924!1.22e-13!173;UBERON:0006601!1.22e-13!173;UBERON:0002780!2.82e-13!41;UBERON:0001890!2.82e-13!41;UBERON:0006240!2.82e-13!41;UBERON:0004732!3.31e-13!13;UBERON:0003080!8.52e-13!42;UBERON:0004121!4.27e-12!169;UBERON:0004733!6.78e-12!12;UBERON:0002028!6.78e-12!12;UBERON:0007277!6.78e-12!12;UBERON:0003076!5.49e-11!15;UBERON:0003057!5.49e-11!15;UBERON:0000033!6.87e-11!123;UBERON:0000153!8.01e-10!129;UBERON:0007811!8.01e-10!129;UBERON:0002020!5.28e-09!34;UBERON:0003528!5.28e-09!34;UBERON:0001893!6.09e-09!34;UBERON:0002680!1.14e-08!9;UBERON:0001895!1.14e-08!9;UBERON:0010092!1.14e-08!9;UBERON:0001869!1.16e-08!32;UBERON:0007023!1.56e-08!115;UBERON:0000956!3.30e-08!25;UBERON:0000203!3.30e-08!25;UBERON:0002791!3.31e-08!33;UBERON:0000025!2.60e-07!194;UBERON:0000483!3.94e-07!309;UBERON:0001950!4.49e-07!20;UBERON:0000119!6.82e-07!312;UBERON:0001894!9.35e-07!7;UBERON:0006222!9.35e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;7.66e-12;2!UBERON:0000013;2.80e-11;5!UBERON:0002410;2.80e-11;5!UBERON:0000010;1.62e-10;8!UBERON:0000922;5.42e-07;49!UBERON:0000941;9.50e-07;1!UBERON:0001785;9.50e-07;1!UBERON:0002464;9.50e-07;1!UBERON:0004904;9.50e-07;1!UBERON:0001021;9.50e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.15e-12,2;UBERON:0000013,2.71e-11,5;UBERON:0002410,2.71e-11,5;UBERON:0001016,9.74e-11,89;UBERON:0000010,1.54e-10,8;UBERON:0000941,8.98e-07,1;UBERON:0001785,8.98e-07,1;UBERON:0002464,8.98e-07,1;UBERON:0004904,8.98e-07,1;UBERON:0001021,8.98e-07,1;UBERON:0003902,8.98e-07,1;UBERON:0005425,8.98e-07,1 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.572471974262113,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184099797284599,0,0,0.10075209822764,0.169560592310488,0,0,0,0.487894824518382,0.397589304964456,1.04574548582567,1.24393266018445,1.7662459561294,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0.463721619900307,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0.710783897485092,0,0.602878754119172,0,0.199945982364114,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.60818530127658,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0.519254429183621,0.116210378459959,0,0.601519410909855,0,0,0.182091168006717,0,0.451199612907412,0.15403067420883,0,0,0.422206515571503,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0.929691098594572,0,0,0,0,0.869932992075073,0.55597265731176,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0.136499911407986,0.424216295861138,0,0.551365343546124,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0.709522128141196,0,0,0,1.04980416073495,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,26.5991937107408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63337622438398,0,0,0.503865495708552,1.84083628503879,0,0,0,0,0,0,0,0,2.90799823828566,0,7.98455192004777,0,0,0,0,0,0,0.689486746482929,0,0,0,0,3.05163472634166,0.663475559587348,2.95547618953547,0.438770794307945,0,0,0,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0.569219092059585,0,2.2562765983567,0,0,0,0,0,0,0,0,0,2.03382666702479,0,0,0.253243183823515,0.391102765469606,0,0,0,0,0,0.343189995723929,0,0.248505071130865,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,1.59743200399193,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0.321506296930038,1.51293380256957,0.83088067605837,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0.573409195690071,0.443716206147409,0.558867626472451,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0.449803112163605,0.155262956876259,0,0,0.521745061811734,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85998610953876,10.3511818940815,0,7.53546503524896,0,1.2754495206101,2.47871528518004,0,0,0,4.00285374142735,0,0.6124909547064,0.128458450192919,0,0,0.615349092722265,0.252071696221718,0.414943514785307,0,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.472763092328763,0,0,0.126831620387814,0.546974809018219,0,0,0.351742488719241,0,0,0.336283722218824,1.82089681270989,1.59363533945908,0,0,0,0.135939465953663,0.0657727735628491,0,0,0.39246546425257,0,0,0.913158720509496,0,0,0.714765441766563,8.69074864529996,18.2499037827957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,4.3769170535501,0.594600453887843,0,0,1.35866559210006,0.0771741581079447,0.218559560503957,0,0,0.235676547101626,0,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0,1.41994405973866,0.339957450954573,0,0.5290268405154,0,0,0,0.126166424835079,0.437062287854782,4.05435203236598,1.01988829741982,0,0.18378979906969,0.50141507858475,0.985123076837112,1.87574891109325,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@CALY | |||
}} |
Latest revision as of 05:36, 17 September 2015
Short description: | p2@CALY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CALY_5end |
Coexpression cluster: | C2993_Wilms_rhabdomyosarcoma_neuroblastoma_retinoblastoma_brain_cerebellum_teratocarcinoma |
Association with transcript: | 32bp_to_ENST00000467611_5end |
EntrezGene: | CALY |
HGNC: | 17938 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.90e-10 | 5 |
migratory neural crest cell | 2.90e-07 | 41 |
lung fibroblast | 3.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.15e-12 | 2 |
sympathetic nervous system | 2.71e-11 | 5 |
autonomic nervous system | 2.71e-11 | 5 |
nervous system | 9.74e-11 | 89 |
peripheral nervous system | 1.54e-10 | 8 |
cranial nerve II | 8.98e-07 | 1 |
cranial nerve | 8.98e-07 | 1 |
nerve trunk | 8.98e-07 | 1 |
nerve connecting eye with brain | 8.98e-07 | 1 |
nerve | 8.98e-07 | 1 |
retinal neural layer | 8.98e-07 | 1 |
presumptive neural retina | 8.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.60e-14 | 10 |
germ cell and embryonal cancer | 7.56e-12 | 22 |
germ cell cancer | 7.56e-12 | 22 |
neuroendocrine tumor | 1.74e-09 | 6 |
vascular disease | 7.15e-07 | 1 |
ischemia | 7.15e-07 | 1 |
extrinsic cardiomyopathy | 7.15e-07 | 1 |
myocardial ischemia | 7.15e-07 | 1 |
myocardial infarction | 7.15e-07 | 1 |