FFCP PHASE2:Hg19::chr8:17780346..17780375,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:5108 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:8727 |TSSclass...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5108 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=8727 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q15154,C9JBL6,A2RUU9 | ||
|association_with_transcript=0bp_to_ENST00000325083,ENST00000325126,NM_006197,uc003wyg.2,uc003wyh.2,uc003wyi.3,uc010lta.1,uc011kyh.1_5end | |association_with_transcript=0bp_to_ENST00000325083,ENST00000325126,NM_006197,uc003wyg.2,uc003wyh.2,uc003wyi.3,uc010lta.1,uc011kyh.1_5end | ||
|cluster_id=chr8:17780346..17780375,+ | |cluster_id=chr8:17780346..17780375,+ |
Latest revision as of 05:39, 17 September 2015
Short description: | p2@PCM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PCM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000325083, ENST00000325126, NM_006197, uc003wyg.2, uc003wyh.2, uc003wyi.3, uc010lta.1, uc011kyh.1_5end |
EntrezGene: | PCM1 |
HGNC: | 8727 |
UniProt: | Q15154C9JBL6A2RUU9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@PCM1 |
---|
0
5
10
15
20
25
30
35
40
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 4.73e-27 | 161 |
hematopoietic multipotent progenitor cell | 4.73e-27 | 161 |
hematopoietic stem cell | 2.38e-26 | 168 |
myeloid cell | 2.95e-25 | 108 |
common myeloid progenitor | 2.95e-25 | 108 |
leukocyte | 2.89e-23 | 136 |
hematopoietic cell | 1.29e-22 | 177 |
hematopoietic lineage restricted progenitor cell | 2.29e-22 | 120 |
myeloid leukocyte | 4.56e-22 | 72 |
nongranular leukocyte | 2.20e-21 | 115 |
Showing 1 to 10 of 22 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.71e-21 | 98 |
blood island | 1.71e-21 | 98 |
hemolymphoid system | 3.28e-18 | 108 |
bone marrow | 8.55e-17 | 76 |
bone element | 2.31e-15 | 82 |
immune system | 1.71e-14 | 93 |
skeletal element | 7.21e-14 | 90 |
adult organism | 6.46e-12 | 114 |
skeletal system | 1.19e-11 | 100 |
Showing 1 to 9 of 9 entries