FFCP PHASE1:Hg19::chr19:32836499..32836551,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:32836499..32836551,+ to FFCP PHASE1:Hg19::chr19:32836499..32836551,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22847 | |EntrezGene=22847 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23783 | |HGNC=23783 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TCN5 | |UniProt=Q8TCN5 | ||
|association_with_transcript=0bp_to_ENST00000311921,ENST00000355898,NM_001136156,NM_014910,uc002ntc.2,uc002ntd.2,uc002nte.2,uc010xrn.1_5end | |||
|cluster_id=chr19:32836499..32836551,+ | |||
|description=CAGE_peak_1_at_ZNF507_5end | |||
|id=chr19:32836499..32836551,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.72e-08!53;CL:0000051!1.72e-08!53;CL:0000838!2.17e-08!52;CL:0000791!2.91e-07!18;CL:0000789!2.91e-07!18;CL:0002420!2.91e-07!18;CL:0002419!2.91e-07!18;CL:0000790!2.91e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.20e-07;18!CL:0000789;3.20e-07;18!CL:0002419;3.20e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.72e-08,53;CL:0000051,1.72e-08,53;CL:0000838,2.16e-08,52;CL:0000791,2.90e-07,18;CL:0000789,2.90e-07,18;CL:0002420,2.90e-07,18;CL:0002419,2.90e-07,18;CL:0000790,2.90e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.13e-07;82!CL:0000790;3.20e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.40e-36!115;UBERON:0001049!1.07e-17!57;UBERON:0005068!1.07e-17!57;UBERON:0006241!1.07e-17!57;UBERON:0007135!1.07e-17!57;UBERON:0002616!1.17e-15!59;UBERON:0001017!1.28e-15!82;UBERON:0002780!1.29e-15!41;UBERON:0001890!1.29e-15!41;UBERON:0006240!1.29e-15!41;UBERON:0000073!1.73e-15!94;UBERON:0001016!1.73e-15!94;UBERON:0003080!2.27e-15!42;UBERON:0000955!2.57e-15!69;UBERON:0006238!2.57e-15!69;UBERON:0005743!1.61e-14!86;UBERON:0002020!1.96e-12!34;UBERON:0003528!1.96e-12!34;UBERON:0001893!2.38e-12!34;UBERON:0003075!3.08e-12!86;UBERON:0007284!3.08e-12!86;UBERON:0002346!4.38e-12!90;UBERON:0002791!5.98e-12!33;UBERON:0001869!1.56e-11!32;UBERON:0000153!1.29e-10!129;UBERON:0007811!1.29e-10!129;UBERON:0000033!2.41e-09!123;UBERON:0000924!3.78e-09!173;UBERON:0006601!3.78e-09!173;UBERON:0004121!4.14e-09!169;UBERON:0002619!1.15e-08!22;UBERON:0003056!1.54e-08!61;UBERON:0000956!3.74e-08!25;UBERON:0000203!3.74e-08!25;UBERON:0001950!6.21e-08!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.45e-11;41!UBERON:0001890;2.45e-11;41!UBERON:0003528;9.12e-11;34!UBERON:0002020;9.12e-11;34!UBERON:0001893;1.08e-10;34!UBERON:0000073;1.73e-10;53!UBERON:0002616;1.73e-10;53!UBERON:0002791;1.95e-10;32!UBERON:0001869;2.27e-10;32!UBERON:0007023;2.99e-10;114!UBERON:0002619;1.59e-08;22!UBERON:0000956;4.79e-08;25!UBERON:0000203;4.79e-08;25!UBERON:0001950;8.56e-08;20!UBERON:0001016;1.81e-07;83!UBERON:0001017;1.89e-07;75!UBERON:0000955;5.04e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.45e-36,114;UBERON:0001049,6.67e-18,56;UBERON:0005068,6.67e-18,56;UBERON:0006241,6.67e-18,56;UBERON:0007135,6.67e-18,56;UBERON:0000073,9.34e-17,53;UBERON:0002616,9.34e-17,53;UBERON:0001016,1.17e-16,89;UBERON:0001017,1.00e-15,81;UBERON:0002780,1.28e-15,41;UBERON:0001890,1.28e-15,41;UBERON:0003080,1.28e-15,41;UBERON:0006240,1.28e-15,41;UBERON:0000955,1.90e-15,68;UBERON:0006238,1.90e-15,68;UBERON:0011216,3.70e-13,223;UBERON:0003528,1.96e-12,34;UBERON:0002020,1.96e-12,34;UBERON:0001893,2.37e-12,34;UBERON:0002791,1.20e-11,32;UBERON:0001869,1.55e-11,32;UBERON:0003075,2.17e-11,82;UBERON:0007284,2.17e-11,82;UBERON:0002346,3.03e-11,86;UBERON:0003056,4.59e-09,61;UBERON:0002619,1.15e-08,22;UBERON:0004121,2.67e-08,171;UBERON:0000924,2.67e-08,171;UBERON:0006601,2.67e-08,171;UBERON:0000956,3.73e-08,25;UBERON:0000203,3.73e-08,25;UBERON:0001950,6.20e-08,20;UBERON:0010314,1.16e-07,132 | |||
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| ||
|short_description=p1@ZNF507 | |||
}} | }} |
Latest revision as of 05:40, 17 September 2015
Short description: | p1@ZNF507 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF507_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000311921, ENST00000355898, NM_001136156, NM_014910, uc002ntc.2, uc002ntd.2, uc002nte.2, uc010xrn.1_5end |
EntrezGene: | ZNF507 |
HGNC: | 23783 |
UniProt: | Q8TCN5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.72e-08 | 53 |
common lymphoid progenitor | 1.72e-08 | 53 |
lymphoid lineage restricted progenitor cell | 2.16e-08 | 52 |
mature alpha-beta T cell | 2.90e-07 | 18 |
alpha-beta T cell | 2.90e-07 | 18 |
immature T cell | 2.90e-07 | 18 |
mature T cell | 2.90e-07 | 18 |
immature alpha-beta T cell | 2.90e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.45e-36 | 114 |
neural tube | 6.67e-18 | 56 |
neural rod | 6.67e-18 | 56 |
future spinal cord | 6.67e-18 | 56 |
neural keel | 6.67e-18 | 56 |
regional part of nervous system | 9.34e-17 | 53 |
regional part of brain | 9.34e-17 | 53 |
nervous system | 1.17e-16 | 89 |
central nervous system | 1.00e-15 | 81 |
regional part of forebrain | 1.28e-15 | 41 |
forebrain | 1.28e-15 | 41 |
anterior neural tube | 1.28e-15 | 41 |
future forebrain | 1.28e-15 | 41 |
brain | 1.90e-15 | 68 |
future brain | 1.90e-15 | 68 |
organ system subdivision | 3.70e-13 | 223 |
brain grey matter | 1.96e-12 | 34 |
gray matter | 1.96e-12 | 34 |
telencephalon | 2.37e-12 | 34 |
regional part of telencephalon | 1.20e-11 | 32 |
cerebral hemisphere | 1.55e-11 | 32 |
neural plate | 2.17e-11 | 82 |
presumptive neural plate | 2.17e-11 | 82 |
neurectoderm | 3.03e-11 | 86 |
pre-chordal neural plate | 4.59e-09 | 61 |
regional part of cerebral cortex | 1.15e-08 | 22 |
ectoderm-derived structure | 2.67e-08 | 171 |
ectoderm | 2.67e-08 | 171 |
presumptive ectoderm | 2.67e-08 | 171 |
cerebral cortex | 3.73e-08 | 25 |
pallium | 3.73e-08 | 25 |
neocortex | 6.20e-08 | 20 |
structure with developmental contribution from neural crest | 1.16e-07 | 132 |