FFCP PHASE1:Hg19::chr13:36788658..36788703,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100526761,54937 | |EntrezGene=100526761,54937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26026,38866 | |HGNC=26026,38866 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENST00000317764_5end | |association_with_transcript=21bp_to_ENST00000317764_5end | ||
|cluster_id=chr13:36788658..36788703,- | |||
|coexpression_cluster_id=C169 | |coexpression_cluster_id=C169 | ||
|description=CAGE_peak_2_at_CCDC169-SOHLH2_5end,CAGE_peak_2_at_SOHLH2_5end | |description=CAGE_peak_2_at_CCDC169-SOHLH2_5end,CAGE_peak_2_at_SOHLH2_5end | ||
|id=chr13:36788658..36788703,- | |id=chr13:36788658..36788703,- | ||
|ontology_enrichment_celltype=CL:0002541!3.27e-15!3;CL:0002178!9.66e-08!3 | |ontology_enrichment_celltype=CL:0002541!3.27e-15!3;CL:0002178!9.66e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.78e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.78e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.76e-10!8;DOID:2531!5.20e-08!51;DOID:0060083!5.20e-08!51;DOID:2355!9.91e-07!1 | |ontology_enrichment_disease=DOID:1036!1.76e-10!8;DOID:2531!5.20e-08!51;DOID:0060083!5.20e-08!51;DOID:2355!9.91e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.15e-17;8!DOID:2355;1.65e-10;1!DOID:0050619;2.97e-10;1!DOID:1357;2.97e-10;1!DOID:4960;5.30e-10;1!DOID:0070004;5.30e-10;1!DOID:1240;3.35e-07;39!DOID:8692;4.51e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.20e-17,8;DOID:2355,1.65e-10,1;DOID:0050619,2.84e-10,1;DOID:1357,2.84e-10,1;DOID:162,3.22e-10,235;DOID:4960,4.85e-10,1;DOID:0070004,4.85e-10,1;DOID:14566,6.12e-10,239;DOID:2531,6.63e-10,51;DOID:0060083,6.63e-10,51;DOID:0050686,2.14e-08,137;DOID:1240,1.52e-07,39;DOID:8692,7.88e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0000476!3.27e-15!3;UBERON:0000920!3.27e-15!3;UBERON:0003124!2.86e-11!7;UBERON:0005631!1.84e-08!14;UBERON:0000158!1.84e-08!14 | |ontology_enrichment_uberon=UBERON:0000476!3.27e-15!3;UBERON:0000920!3.27e-15!3;UBERON:0003124!2.86e-11!7;UBERON:0005631!1.84e-08!14;UBERON:0000158!1.84e-08!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;2.48e-10;1!UBERON:0009842;2.48e-10;1!UBERON:0003704;2.48e-10;1!UBERON:0001171;2.48e-10;1!UBERON:0001172;2.48e-10;1!UBERON:0001764;2.97e-10;1!UBERON:0001825;2.97e-10;1!UBERON:0002146;7.55e-10;1!UBERON:0005623;7.55e-10;1!UBERON:0000945;7.77e-08;5!UBERON:0010039;7.77e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,2.59e-10,1;UBERON:0009842,2.59e-10,1;UBERON:0003704,2.59e-10,1;UBERON:0001171,2.59e-10,1;UBERON:0001172,2.59e-10,1;UBERON:0001764,2.84e-10,1;UBERON:0001825,2.84e-10,1;UBERON:0002146,6.91e-10,1;UBERON:0005623,6.91e-10,1 | |||
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|short_description=p2@CCDC169-SOHLH2,p2@SOHLH2 | |short_description=p2@CCDC169-SOHLH2,p2@SOHLH2 | ||
}} | }} |
Latest revision as of 05:41, 17 September 2015
Short description: | p2@CCDC169-SOHLH2, p2@SOHLH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCDC169-SOHLH2_5end, CAGE_peak_2_at_SOHLH2_5end |
Coexpression cluster: | C169_hereditary_adult_gall_lymphangiectasia_chronic_b_choriocarcinoma |
Association with transcript: | 21bp_to_ENST00000317764_5end |
EntrezGene: | 100526761,54937 |
HGNC: | 38866&submit=Submit 26026, 38866 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.78e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 2.59e-10 | 1 |
acinus | 2.59e-10 | 1 |
intrahepatic bile duct | 2.59e-10 | 1 |
portal lobule | 2.59e-10 | 1 |
hepatic acinus | 2.59e-10 | 1 |
maxillary sinus | 2.84e-10 | 1 |
paranasal sinus | 2.84e-10 | 1 |
pulmonary valve | 6.91e-10 | 1 |
semi-lunar valve | 6.91e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.20e-17 | 8 |
anemia | 1.65e-10 | 1 |
paranasal sinus cancer | 2.84e-10 | 1 |
maxillary sinus cancer | 2.84e-10 | 1 |
cancer | 3.22e-10 | 235 |
bone marrow cancer | 4.85e-10 | 1 |
myeloma | 4.85e-10 | 1 |
disease of cellular proliferation | 6.12e-10 | 239 |
hematologic cancer | 6.63e-10 | 51 |
immune system cancer | 6.63e-10 | 51 |
organ system cancer | 2.14e-08 | 137 |
leukemia | 1.52e-07 | 39 |
myeloid leukemia | 7.88e-07 | 31 |