FFCP PHASE1:Hg19::chr1:27022839..27022890,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8289 | |EntrezGene=8289 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11110 | |HGNC=11110 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000457599_5end | |association_with_transcript=-4bp_to_ENST00000457599_5end | ||
|cluster_id=chr1:27022839..27022890,+ | |||
|description=CAGE_peak_3_at_ARID1A_5end | |description=CAGE_peak_3_at_ARID1A_5end | ||
|id=chr1:27022839..27022890,+ | |id=chr1:27022839..27022890,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.61e-26!115;UBERON:0001049!3.81e-18!57;UBERON:0005068!3.81e-18!57;UBERON:0006241!3.81e-18!57;UBERON:0007135!3.81e-18!57;UBERON:0001017!4.11e-15!82;UBERON:0002616!1.12e-14!59;UBERON:0005743!1.74e-14!86;UBERON:0003080!3.37e-14!42;UBERON:0002780!4.80e-14!41;UBERON:0001890!4.80e-14!41;UBERON:0006240!4.80e-14!41;UBERON:0000955!5.22e-14!69;UBERON:0006238!5.22e-14!69;UBERON:0000073!6.56e-14!94;UBERON:0001016!6.56e-14!94;UBERON:0003075!1.71e-12!86;UBERON:0007284!1.71e-12!86;UBERON:0002346!3.15e-12!90;UBERON:0001893!1.60e-11!34;UBERON:0002020!2.00e-11!34;UBERON:0003528!2.00e-11!34;UBERON:0002791!4.24e-11!33;UBERON:0001869!2.28e-10!32;UBERON:0003056!2.97e-10!61;UBERON:0000153!6.44e-08!129;UBERON:0007811!6.44e-08!129;UBERON:0002619!7.05e-08!22;UBERON:0000956!7.47e-08!25;UBERON:0000203!7.47e-08!25;UBERON:0000033!3.07e-07!123;UBERON:0001950!5.43e-07!20;UBERON:0004121!6.93e-07!169;UBERON:0000924!7.03e-07!173;UBERON:0006601!7.03e-07!173 | |ontology_enrichment_uberon=UBERON:0007023!8.61e-26!115;UBERON:0001049!3.81e-18!57;UBERON:0005068!3.81e-18!57;UBERON:0006241!3.81e-18!57;UBERON:0007135!3.81e-18!57;UBERON:0001017!4.11e-15!82;UBERON:0002616!1.12e-14!59;UBERON:0005743!1.74e-14!86;UBERON:0003080!3.37e-14!42;UBERON:0002780!4.80e-14!41;UBERON:0001890!4.80e-14!41;UBERON:0006240!4.80e-14!41;UBERON:0000955!5.22e-14!69;UBERON:0006238!5.22e-14!69;UBERON:0000073!6.56e-14!94;UBERON:0001016!6.56e-14!94;UBERON:0003075!1.71e-12!86;UBERON:0007284!1.71e-12!86;UBERON:0002346!3.15e-12!90;UBERON:0001893!1.60e-11!34;UBERON:0002020!2.00e-11!34;UBERON:0003528!2.00e-11!34;UBERON:0002791!4.24e-11!33;UBERON:0001869!2.28e-10!32;UBERON:0003056!2.97e-10!61;UBERON:0000153!6.44e-08!129;UBERON:0007811!6.44e-08!129;UBERON:0002619!7.05e-08!22;UBERON:0000956!7.47e-08!25;UBERON:0000203!7.47e-08!25;UBERON:0000033!3.07e-07!123;UBERON:0001950!5.43e-07!20;UBERON:0004121!6.93e-07!169;UBERON:0000924!7.03e-07!173;UBERON:0006601!7.03e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.08e-10;53!UBERON:0002616;4.08e-10;53!UBERON:0002780;5.11e-10;41!UBERON:0001890;5.11e-10;41!UBERON:0001893;6.50e-10;34!UBERON:0003528;1.04e-09;34!UBERON:0002020;1.04e-09;34!UBERON:0002791;2.36e-09;32!UBERON:0001869;3.47e-09;32!UBERON:0000956;9.51e-08;25!UBERON:0000203;9.51e-08;25!UBERON:0002619;1.05e-07;22!UBERON:0001950;7.25e-07;20!UBERON:0007023;8.42e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.28e-25,114;UBERON:0001049,3.39e-18,56;UBERON:0005068,3.39e-18,56;UBERON:0006241,3.39e-18,56;UBERON:0007135,3.39e-18,56;UBERON:0000073,4.29e-17,53;UBERON:0002616,4.29e-17,53;UBERON:0001017,3.90e-15,81;UBERON:0001016,1.80e-14,89;UBERON:0002780,3.30e-14,41;UBERON:0001890,3.30e-14,41;UBERON:0003080,3.30e-14,41;UBERON:0006240,3.30e-14,41;UBERON:0003075,4.52e-14,82;UBERON:0007284,4.52e-14,82;UBERON:0000955,6.85e-14,68;UBERON:0006238,6.85e-14,68;UBERON:0002346,9.78e-14,86;UBERON:0001893,1.19e-11,34;UBERON:0003528,1.49e-11,34;UBERON:0002020,1.49e-11,34;UBERON:0002791,1.20e-10,32;UBERON:0003056,1.52e-10,61;UBERON:0001869,1.75e-10,32;UBERON:0011216,2.29e-10,223;UBERON:0010371,9.84e-10,104;UBERON:0002619,5.83e-08,22;UBERON:0000956,6.18e-08,25;UBERON:0000203,6.18e-08,25;UBERON:0004121,2.43e-07,171;UBERON:0000924,2.43e-07,171;UBERON:0006601,2.43e-07,171;UBERON:0001950,4.61e-07,20 | |||
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| ||
|short_description=p3@ARID1A | |short_description=p3@ARID1A | ||
}} | }} |
Latest revision as of 06:20, 17 September 2015
Short description: | p3@ARID1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARID1A_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000457599_5end |
EntrezGene: | ARID1A |
HGNC: | 11110 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.28e-25 | 114 |
neural tube | 3.39e-18 | 56 |
neural rod | 3.39e-18 | 56 |
future spinal cord | 3.39e-18 | 56 |
neural keel | 3.39e-18 | 56 |
regional part of nervous system | 4.29e-17 | 53 |
regional part of brain | 4.29e-17 | 53 |
central nervous system | 3.90e-15 | 81 |
nervous system | 1.80e-14 | 89 |
regional part of forebrain | 3.30e-14 | 41 |
forebrain | 3.30e-14 | 41 |
anterior neural tube | 3.30e-14 | 41 |
future forebrain | 3.30e-14 | 41 |
neural plate | 4.52e-14 | 82 |
presumptive neural plate | 4.52e-14 | 82 |
brain | 6.85e-14 | 68 |
future brain | 6.85e-14 | 68 |
neurectoderm | 9.78e-14 | 86 |
telencephalon | 1.19e-11 | 34 |
brain grey matter | 1.49e-11 | 34 |
gray matter | 1.49e-11 | 34 |
regional part of telencephalon | 1.20e-10 | 32 |
pre-chordal neural plate | 1.52e-10 | 61 |
cerebral hemisphere | 1.75e-10 | 32 |
organ system subdivision | 2.29e-10 | 223 |
ecto-epithelium | 9.84e-10 | 104 |
regional part of cerebral cortex | 5.83e-08 | 22 |
cerebral cortex | 6.18e-08 | 25 |
pallium | 6.18e-08 | 25 |
ectoderm-derived structure | 2.43e-07 | 171 |
ectoderm | 2.43e-07 | 171 |
presumptive ectoderm | 2.43e-07 | 171 |
neocortex | 4.61e-07 | 20 |