FFCP PHASE1:Hg19::chr11:2017366..2017393,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:2017366..2017393,- to FFCP PHASE1:Hg19::chr11:2017366..2017393,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=27bp_to_ENST00000442037_5end | |||
|cluster_id=chr11:2017366..2017393,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_3_at_H19_5end | |||
|id=chr11:2017366..2017393,- | |||
|ontology_enrichment_celltype=CL:0000188!3.50e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.15e-13;19!CL:0000188;1.35e-09;9!CL:0000680;4.25e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.14e-13,19;CL:0000188,1.14e-09,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!9.50e-12!14;UBERON:0000158!9.50e-12!14;UBERON:0000481!1.60e-09!347;UBERON:0001557!1.69e-09!19;UBERON:0000478!2.54e-09!24;UBERON:0001737!2.87e-09!9;UBERON:0003104!3.87e-09!238;UBERON:0009142!3.87e-09!238;UBERON:0004923!6.51e-09!57;UBERON:0003124!3.04e-08!7;UBERON:0004119!4.22e-08!169;UBERON:0000925!4.22e-08!169;UBERON:0006595!4.22e-08!169;UBERON:0000064!1.31e-07!219;UBERON:0000468!5.85e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;6.85e-18;16!UBERON:0002036;6.85e-18;16!UBERON:0000478;4.28e-13;24!UBERON:0001737;1.14e-12;9!UBERON:0001557;1.14e-12;9!UBERON:0005631;1.08e-09;10!UBERON:0000158;1.08e-09;10!UBERON:0002385;7.62e-08;31!UBERON:0001015;7.62e-08;31!UBERON:0000383;7.62e-08;31!UBERON:0003688;3.30e-07;6!UBERON:0002358;3.30e-07;6!UBERON:0003684;3.30e-07;6!UBERON:0001178;3.30e-07;6!UBERON:0001987;4.07e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.72e-15,14;UBERON:0000158,5.72e-15,14;UBERON:0000478,4.25e-13,24;UBERON:0001737,1.15e-12,9;UBERON:0003124,3.42e-11,7;UBERON:0001557,2.79e-10,19;UBERON:0003104,3.46e-08,160;UBERON:0009142,3.46e-08,160;UBERON:0002100,5.58e-08,199;UBERON:0001041,8.93e-08,87;UBERON:0005256,1.51e-07,122;UBERON:0003688,3.80e-07,6;UBERON:0002358,3.80e-07,6;UBERON:0003684,3.80e-07,6;UBERON:0001178,3.80e-07,6;UBERON:0001987,4.05e-07,4;UBERON:0004340,4.05e-07,4;UBERON:0004119,8.09e-07,160;UBERON:0000925,8.09e-07,160;UBERON:0006595,8.09e-07,160;UBERON:0004921,8.33e-07,118 | |||
|phase1_expression=12.3541297903979,4.49611100171065,3.10099689011137,6.00439790118782,6.25745532198203,75.8934515967321,2.53299878168311,0,0,3.68600904752263,2.09340350391728,57.2316394981051,98.1213159009847,1.23766352960047,3.97676850873499,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,6.34746105595912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,0.767175371061182,0,0.50133791063589,0.144846518960824,0,11.1926020169606,0.378139268656271,0.221729397462564,0.087834785693126,0.261958150995425,0.364295288292542,4.44941331341315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,3.36406560085384,0,0,2.8008993185979,0.134710672069688,0.326923806226917,2.27036141467397,25.35174067712,1.87457145467037,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.53156377191122,1.65857688024593,1.51392510525377,0,0,0,0,0.464367928031979,0,25.4359620085664,20.3987474994503,23.1370588688143,30.7720183923379,20.4806677446862,22.7779794346653,27.5055868646735,26.2936763267964,28.8560367709793,2.21446636387394,0,7.4083322039652,44.1026134156626,1.26755034821831,0,4.13552934676983,0,0,0.514703430895577,0,0,0,10.2773174125968,0.651616610620649,0,0,0.463721619900307,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,3.0025378668211,405.880960832799,5.76268235746538,0,2.48774364119782,2.37585561880029,0,0,0,0,0,0,0,0,1.42636905040718,14.7676932800931,14.1778662559765,12.3552064635528,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,5.76650011079957,3.50119364741774,1.89885516589815,0,0,0,0.234282829985426,1.20378439891088,2.27407504055985,7.24311499047534,0,0.553107505625109,0,47.579681263446,76.17784008601,0,0,0,153.079423580361,371.151030108409,102.207919145432,16.1270075082205,1.84154367945675,11.7877239661891,6.02254001501795,3.58195074346692,4.50390979202101,62.3355879068962,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,1.13733384070897,0.340187410553031,1.0795795805107,13.880452742126,0,4.51520796469368,0,0,0.223874754722178,0,0,0,0.328014645699706,0,2.57602529119306,0.183138929636687,0,0,0,0,4.35018232314549,3.38906957652218,8.289198435211,3.72158745708233,2.36324538710202,6.67076792005451,2.81247870473133,34.0992696527004,0,0.384380134730212,0.127612712494584,0,0,0,0,0,0,0,0,0,2.232950216158,2.21465597303108,0.762520775695299,0.767693373934002,53.920312492274,0,0,0.719489830333259,0.54907405947211,0,0,0,0,4.38870365180631,0,0,0.272999822815972,0,0,0,0,0,0,3.9353685122798,0,0,0,0.286822704408103,5.79669341977415,0,0,0.211107635297664,0.987884678879706,1.51789269506286,2.79947776195986,0,0,0,3.29503302718727,0.86101074534246,0,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,358.59421607601,242.620144240266,661.316991619647,0,0,0,0,2.11125408127993,0.996239941255349,0.828851746593443,7.55798243562828,0,0,0,0,0,0,2.56472854656027,0,0,0,0,0,0,0,2.17499872630438,0.568967241427498,0.254253650292766,4.01859059005492,2.06846023944879,0,0,0,0,0,0,0,0,0,0,2.00070672109872,0,0.23056390438806,42.6348810946418,16.1884584163792,320.277164370847,24.9145454053065,896.564493263344,0,0,0,0.451191321234361,0.588187602953219,0.503464760927528,0,0.158936578980379,0,0,0,0,0.995261931078505,0.176915129006678,5.49927130440263,0,0,0,0,115.571181211026,0,0,0,0,0.789168805698781,7.25944296291983,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,2.79562669187248,0,0.19351266257817,0.0730893170861856,0.0821154570532092,1.45483524732629,0.176512253383001,6.55344148263544,0,0,0,0.977756913674015,0,0.640358984218058,199.409990362966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0.717873024576814,0.599037001496973,4.29226048136571,0.89268582976749,6.51679683121245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.472834243795189,5.35036798976981,0,0,0,5.00286728461357,3.97255182219259,0.25426853765475,0,0,0.653174720218818,0,0,0,0,2.05173127149315,78.1790644582106,0,0,0,0,0.213574825135389,5.81655928868764,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0.554805861502613,0.189403005275089,0,1.77962244319307,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,1.59238355479446,83.205775049936,0.343395705182793,1.34699795506368,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,0,1.0362910251936,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,9.95323616052756,0.127894371303652,11.537254819445,0,4.80522408044861,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,1.65157612686837,2.01771458373847,43.3221248063768,0,0,0,0.601682626794058,0,0,44.7860447563232,0,1.92212912082159,0,0,0,0,0,0.548257766857182,10.4204347461752,0,0.766574565837572,0,0,0,0,30.8684248165983,0,3.42976018874837,0,0,0,0,1.0989032999072,0,9.80952571598262,15.5236982486614,0.215927591218621,0,0,0,0,0,0,0,0.51215543128185,0,0.430227358820278,0,0,1.27016115057279,9.85159534739415,0,0,0,0,0,18.7754362784489,9.13698981020598,56.8309071355718,25.2569716390753,0,0,0,0,0,0,0,6.55678681511872,0.470317296361523,1.71603825227734,0.471353094203252,0,0,2.9585900930838,0,0.0939839179798536,4.89879948599187,0,1.96409332466223,0,0,6.57302749421866,0,0,1.10440093535229,0,0,25.9223151852546,3.34795516350076,1.38652688589425,28.5533531001701,0,0.874124575709564,0.380095503034311,0,0,0,0,1.28823786971007,0.267964130156178,0,0,9.38229520364316,14.2838658878244,0.0645889098360061,0.869046000142011,0,0.509177266225319,12.3291485264514,11.321270890642,94.7986244006228,1.21233695426258,0.502055437748735,20.9576024623988,0.814032686109745,0,0,0,39.8889602085872,0.733448665097199,10.1724044578935,0,0.603821380773079,0 | |phase1_expression=12.3541297903979,4.49611100171065,3.10099689011137,6.00439790118782,6.25745532198203,75.8934515967321,2.53299878168311,0,0,3.68600904752263,2.09340350391728,57.2316394981051,98.1213159009847,1.23766352960047,3.97676850873499,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,6.34746105595912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,0.767175371061182,0,0.50133791063589,0.144846518960824,0,11.1926020169606,0.378139268656271,0.221729397462564,0.087834785693126,0.261958150995425,0.364295288292542,4.44941331341315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,3.36406560085384,0,0,2.8008993185979,0.134710672069688,0.326923806226917,2.27036141467397,25.35174067712,1.87457145467037,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.53156377191122,1.65857688024593,1.51392510525377,0,0,0,0,0.464367928031979,0,25.4359620085664,20.3987474994503,23.1370588688143,30.7720183923379,20.4806677446862,22.7779794346653,27.5055868646735,26.2936763267964,28.8560367709793,2.21446636387394,0,7.4083322039652,44.1026134156626,1.26755034821831,0,4.13552934676983,0,0,0.514703430895577,0,0,0,10.2773174125968,0.651616610620649,0,0,0.463721619900307,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,3.0025378668211,405.880960832799,5.76268235746538,0,2.48774364119782,2.37585561880029,0,0,0,0,0,0,0,0,1.42636905040718,14.7676932800931,14.1778662559765,12.3552064635528,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,5.76650011079957,3.50119364741774,1.89885516589815,0,0,0,0.234282829985426,1.20378439891088,2.27407504055985,7.24311499047534,0,0.553107505625109,0,47.579681263446,76.17784008601,0,0,0,153.079423580361,371.151030108409,102.207919145432,16.1270075082205,1.84154367945675,11.7877239661891,6.02254001501795,3.58195074346692,4.50390979202101,62.3355879068962,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,1.13733384070897,0.340187410553031,1.0795795805107,13.880452742126,0,4.51520796469368,0,0,0.223874754722178,0,0,0,0.328014645699706,0,2.57602529119306,0.183138929636687,0,0,0,0,4.35018232314549,3.38906957652218,8.289198435211,3.72158745708233,2.36324538710202,6.67076792005451,2.81247870473133,34.0992696527004,0,0.384380134730212,0.127612712494584,0,0,0,0,0,0,0,0,0,2.232950216158,2.21465597303108,0.762520775695299,0.767693373934002,53.920312492274,0,0,0.719489830333259,0.54907405947211,0,0,0,0,4.38870365180631,0,0,0.272999822815972,0,0,0,0,0,0,3.9353685122798,0,0,0,0.286822704408103,5.79669341977415,0,0,0.211107635297664,0.987884678879706,1.51789269506286,2.79947776195986,0,0,0,3.29503302718727,0.86101074534246,0,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,358.59421607601,242.620144240266,661.316991619647,0,0,0,0,2.11125408127993,0.996239941255349,0.828851746593443,7.55798243562828,0,0,0,0,0,0,2.56472854656027,0,0,0,0,0,0,0,2.17499872630438,0.568967241427498,0.254253650292766,4.01859059005492,2.06846023944879,0,0,0,0,0,0,0,0,0,0,2.00070672109872,0,0.23056390438806,42.6348810946418,16.1884584163792,320.277164370847,24.9145454053065,896.564493263344,0,0,0,0.451191321234361,0.588187602953219,0.503464760927528,0,0.158936578980379,0,0,0,0,0.995261931078505,0.176915129006678,5.49927130440263,0,0,0,0,115.571181211026,0,0,0,0,0.789168805698781,7.25944296291983,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,2.79562669187248,0,0.19351266257817,0.0730893170861856,0.0821154570532092,1.45483524732629,0.176512253383001,6.55344148263544,0,0,0,0.977756913674015,0,0.640358984218058,199.409990362966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0,0.717873024576814,0.599037001496973,4.29226048136571,0.89268582976749,6.51679683121245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.472834243795189,5.35036798976981,0,0,0,5.00286728461357,3.97255182219259,0.25426853765475,0,0,0.653174720218818,0,0,0,0,2.05173127149315,78.1790644582106,0,0,0,0,0.213574825135389,5.81655928868764,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0,0,0.124980407962107,0,0,0,0,0.144921028610825,0,0,0.554805861502613,0.189403005275089,0,1.77962244319307,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,1.59238355479446,83.205775049936,0.343395705182793,1.34699795506368,0,0,0,0.521988583930423,0,0,0,0,0,0,0,0,0,0,1.0362910251936,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,9.95323616052756,0.127894371303652,11.537254819445,0,4.80522408044861,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,1.65157612686837,2.01771458373847,43.3221248063768,0,0,0,0.601682626794058,0,0,44.7860447563232,0,1.92212912082159,0,0,0,0,0,0.548257766857182,10.4204347461752,0,0.766574565837572,0,0,0,0,30.8684248165983,0,3.42976018874837,0,0,0,0,1.0989032999072,0,9.80952571598262,15.5236982486614,0.215927591218621,0,0,0,0,0,0,0,0.51215543128185,0,0.430227358820278,0,0,1.27016115057279,9.85159534739415,0,0,0,0,0,18.7754362784489,9.13698981020598,56.8309071355718,25.2569716390753,0,0,0,0,0,0,0,6.55678681511872,0.470317296361523,1.71603825227734,0.471353094203252,0,0,2.9585900930838,0,0.0939839179798536,4.89879948599187,0,1.96409332466223,0,0,6.57302749421866,0,0,1.10440093535229,0,0,25.9223151852546,3.34795516350076,1.38652688589425,28.5533531001701,0,0.874124575709564,0.380095503034311,0,0,0,0,1.28823786971007,0.267964130156178,0,0,9.38229520364316,14.2838658878244,0.0645889098360061,0.869046000142011,0,0.509177266225319,12.3291485264514,11.321270890642,94.7986244006228,1.21233695426258,0.502055437748735,20.9576024623988,0.814032686109745,0,0,0,39.8889602085872,0.733448665097199,10.1724044578935,0,0.603821380773079,0 | ||
|short_description=p3@H19 | |||
}} | }} |
Latest revision as of 06:24, 17 September 2015
Short description: | p3@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | 27bp_to_ENST00000442037_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.14e-13 | 19 |
cell of skeletal muscle | 1.14e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 5.72e-15 | 14 |
membranous layer | 5.72e-15 | 14 |
extraembryonic structure | 4.25e-13 | 24 |
larynx | 1.15e-12 | 9 |
chorion | 3.42e-11 | 7 |
upper respiratory tract | 2.79e-10 | 19 |
mesenchyme | 3.46e-08 | 160 |
entire embryonic mesenchyme | 3.46e-08 | 160 |
trunk | 5.58e-08 | 199 |
foregut | 8.93e-08 | 87 |
trunk mesenchyme | 1.51e-07 | 122 |
omentum | 3.80e-07 | 6 |
peritoneum | 3.80e-07 | 6 |
abdominal cavity | 3.80e-07 | 6 |
visceral peritoneum | 3.80e-07 | 6 |
placenta | 4.05e-07 | 4 |
allantois | 4.05e-07 | 4 |
endoderm-derived structure | 8.09e-07 | 160 |
endoderm | 8.09e-07 | 160 |
presumptive endoderm | 8.09e-07 | 160 |
subdivision of digestive tract | 8.33e-07 | 118 |